Related references
Note: Only part of the references are listed.Single-cell chromatin immunocleavage sequencing (scChIC-seq) to profile histone modification
Wai Lim Ku et al.
NATURE METHODS (2019)
Profiling of Pluripotency Factors in Single Cells and Early Embryos
Sarah J. Hainer et al.
CELL (2019)
CUT&Tag for efficient epigenomic profiling of small samples and single cells
Hatice S. Kaya-Okur et al.
NATURE COMMUNICATIONS (2019)
A chromatin integration labelling method enables epigenomic profiling with lower input
Akihito Harada et al.
NATURE CELL BIOLOGY (2019)
Integrative single-cell analysis of transcriptional and epigenetic states in the human adult brain
Blue B. Lake et al.
NATURE BIOTECHNOLOGY (2018)
Hippo Signaling Plays an Essential Role in Cell State Transitions during Cardiac Fibroblast Development
Yang Xiao et al.
DEVELOPMENTAL CELL (2018)
Defining murine organogenesis at single-cell resolution reveals a role for the leukotriene pathway in regulating blood progenitor formation
Ximena Ibarra-Soria et al.
NATURE CELL BIOLOGY (2018)
Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation
Sebastian Preissl et al.
NATURE NEUROSCIENCE (2018)
Targeted in situ genome-wide profiling with high efficiency for low cell numbers
Peter J. Skene et al.
NATURE PROTOCOLS (2018)
The cis-regulatory dynamics of embryonic development at single-cell resolution
Darren A. Cusanovich et al.
NATURE (2018)
Sequencing thousands of single-cell genomes with combinatorial indexing
Sarah A. Vitak et al.
NATURE METHODS (2017)
Reversed graph embedding resolves complex single-cell trajectories
Xiaojie Qiu et al.
NATURE METHODS (2017)
Mapping cell type-specific transcriptional enchancers using high affinity, lineage-specific Ep300 bioChIP-seq
Pingzhu Zhou et al.
ELIFE (2017)
EED orchestration of heart maturation through interaction with HDACs is H3K27me3-independent
Shanshan Ai et al.
ELIFE (2017)
Resetting Epigenetic Memory by Reprogramming of Histone Modifications in Mammals
Hui Zheng et al.
MOLECULAR CELL (2016)
deepTools2: a next generation web server for deep-sequencing data analysis
Fidel Ramirez et al.
NUCLEIC ACIDS RESEARCH (2016)
Quantitative Dynamics of Chromatin Remodeling during Germ Cell Specification from Mouse Embryonic Stem Cells
Kazuki Kurimoto et al.
CELL STEM CELL (2015)
Single-cell chromatin accessibility reveals principles of regulatory variation
Jason D. Buenostro et al.
NATURE (2015)
Spatial reconstruction of single-cell gene expression data
Rahul Satija et al.
NATURE BIOTECHNOLOGY (2015)
Single-cell ChIP-seq reveals cell subpopulations defined by chromatin state
Assaf Rotem et al.
NATURE BIOTECHNOLOGY (2015)
A microfluidic device for epigenomic profiling using 100 cells
Zhenning Cao et al.
NATURE METHODS (2015)
ChIPmentation: fast, robust, low-input ChIP-seq for histones and transcription factors
Christian Schmidt et al.
NATURE METHODS (2015)
Computational and analytical challenges in single-cell transcriptomics
Oliver Stegle et al.
NATURE REVIEWS GENETICS (2015)
An ultra-low-input native ChIP-seq protocol for genome-wide profiling of rare cell populations
Julie Brind'Amour et al.
NATURE COMMUNICATIONS (2015)
Reorganization of Enhancer Patterns in Transition from Naive to Primed Pluripotency
Christa Buecker et al.
CELL STEM CELL (2014)
Tn5 transposase and tagmentation procedures for massively scaled sequencing projects
Simone Picelli et al.
GENOME RESEARCH (2014)
Haplotype-resolved whole-genome sequencing by contiguity-preserving transposition and combinatorial indexing
Sasan Amini et al.
NATURE GENETICS (2014)
Quantitative single-cell RNA-seq with unique molecular identifiers
Saiful Islam et al.
NATURE METHODS (2014)
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
Helga Thorvaldsdottir et al.
BRIEFINGS IN BIOINFORMATICS (2013)
Rapid and Pervasive Changes in Genome-wide Enhancer Usage during Mammalian Development
Alex S. Nord et al.
CELL (2013)
Predicting the molecular complexity of sequencing libraries
Timothy Daley et al.
NATURE METHODS (2013)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Highly multiplexed and strand-specific single-cell RNA 5′ end sequencing
Saiful Islam et al.
NATURE PROTOCOLS (2012)
Whole-genome chromatin profiling from limited numbers of cells using nano-ChIP-seq
Mazhar Adli et al.
NATURE PROTOCOLS (2011)
A robust and high-throughput Cre reporting and characterization system for the whole mouse brain
Linda Madisen et al.
NATURE NEUROSCIENCE (2010)
Chromatin Signatures in Multipotent Human Hematopoietic Stem Cells Indicate the Fate of Bivalent Genes during Differentiation
Kairong Cui et al.
CELL STEM CELL (2009)
Origins and fates of cardiovascular progenitor cells
Sean M. Wu et al.
CELL (2008)
The ground state of embryonic stem cell self-renewal
Qi-Long Ying et al.
NATURE (2008)
Design and analysis of ChIP-seq experiments for DNA-binding proteins
Peter V. Kharchenko et al.
NATURE BIOTECHNOLOGY (2008)
Model-based Analysis of ChIP-Seq (MACS)
Yong Zhang et al.
GENOME BIOLOGY (2008)
Evidence Based Selection of Housekeeping Genes
Hendrik J. M. de Jonge et al.
PLOS ONE (2007)
High-resolution genome-wide mapping of histone modifications
TY Roh et al.
NATURE BIOTECHNOLOGY (2004)
Lineage choice and differentiation in mouse embryos and embryonic stem cells
DAF Loebel et al.
DEVELOPMENTAL BIOLOGY (2003)