Journal
GENOME BIOLOGY AND EVOLUTION
Volume 12, Issue 1, Pages 3562-3579Publisher
OXFORD UNIV PRESS
DOI: 10.1093/gbe/evz200
Keywords
V1R; vomeronasal system; pheromone; Lemuriformes; synteny; gene family evolution
Categories
Funding
- Duke Research Computing
- Duke Data Commons (NIH) [1OD018164-01]
- John Simon Guggenheim Foundation
- Alexander von Humboldt Foundation
- DTRI pilot program, NIH [R01 DC014423]
- NIH NRSA [5F31DC017394]
- NSF [DEB-1354610]
- Duke University
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Sensory gene families are of special interest for both what they can tell us about molecular evolution and what they imply as mediators of social communication. The vomeronasal type-1 receptors (V1Rs) have often been hypothesized as playing a fundamental role in driving or maintaining species boundaries given their likely function as mediators of intraspecific mate choice, particularly in nocturnal mammals. Here, we employ a comparative genomic approach for revealing patterns of V1R evolution within primates, with a special focus on the small-bodied nocturnal mouse and dwarf lemurs of Madagascar (genera Microcebus and Cheirogaleus, respectively). By doubling the existing genomic resources for strepsirrhine primates (i.e. the lemurs and lorises), we find that the highly speciose and morphologically cryptic mouse lemurs have experienced an elaborate proliferation of V1Rs that we argue is functionally related to their capacity for rapid lineage diversification. Contrary to a previous study that found equivalent degrees of V1R diversity in diurnal and nocturnal lemurs, our study finds a strong correlation between nocturnality and V1R elaboration, with nocturnal lemurs showing elaborate V1R repertoires and diurnal lemurs showing less diverse repertoires. Recognized subfamilies among V1Rs show unique signatures of diversifying positive selection, as might be expected if they have each evolved to respond to specific stimuli. Furthermore, a detailed syntenic comparison of mouse lemurs with mouse (genus Mus) and other mammalian outgroups shows that orthologous mammalian subfamilies, predicted to be of ancient origin, tend to cluster in a densely populated region across syntenic chromosomes that we refer to as a V1R hotspot.
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