Related references
Note: Only part of the references are listed.Evaluation of DESS as a storage medium for microbial community analysis
Kevin M. Lee et al.
PEERJ (2019)
Effect of salinity on diazotrophic activity and microbial composition of phototrophic communities from Bitter-1 soda lake (Kulunda Steppe, Russia)
Zorigto Namsaraev et al.
EXTREMOPHILES (2018)
A novel bacterial sulfur oxidation pathway provides a new link between the cycles of organic and inorganic sulfur compounds
Tobias Koch et al.
ISME JOURNAL (2018)
Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle
Karthik Anantharaman et al.
ISME JOURNAL (2018)
A second RNA-binding protein is essential for ethanol tolerance provided by the bacterial OLE ribonucleoprotein complex
Kimberly A. Harris et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Insights into the ecology, evolution, and metabolism of the widespread Woesearchaeotal lineages
Xiaobo Liu et al.
MICROBIOME (2018)
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
Donovan H. Parks et al.
NATURE BIOTECHNOLOGY (2018)
A metagenomics roadmap to the uncultured genome diversity in hypersaline soda lake sediments
Charlotte D. Vavourakis et al.
MICROBIOME (2018)
Sulfur Respiration in a Group of Facultatively Anaerobic Natronoarchaea Ubiquitous in Hypersaline Soda Lakes
Dimitry Y. Sorokin et al.
FRONTIERS IN MICROBIOLOGY (2018)
Metabolism and Occurrence of Methanogenic and Sulfate-Reducing Syntrophic Acetate Oxidizing Communities in Haloalkaline Environments
Peer H. A. Timmers et al.
FRONTIERS IN MICROBIOLOGY (2018)
Nitrogen fixation in a chemoautotrophic lucinid symbiosis
Sten Koenig et al.
NATURE MICROBIOLOGY (2017)
Genomic Analysis of the Evolution of Phototrophy among Haloalkaliphilic Rhodobacterales
Karel Kopejtka et al.
GENOME BIOLOGY AND EVOLUTION (2017)
An evaluation of Thiomicrospira, Hydrogenovibrio and Thioalkalimicrobium: reclassification of four species of Thiomicrospira to each Thiomicrorhabdus gen. nov and Hydrogenovibrio, and reclassification of all four species of Thioalkalimicrobium to Thiomicrospira
Rich Boden et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2017)
Nitrincola alkalilacustris sp nov and Nitrincola schmidtii sp nov., alkaliphilic bacteria isolated from soda pans, and emended description of the genus Nitrincola
Andrea K. Borsodi et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2017)
Metatranscriptomic analysis of prokaryotic communities active in sulfur and arsenic cycling in Mono Lake, California, USA
Christian F. Edwardson et al.
ISME JOURNAL (2017)
Niche partitioning of diverse sulfur-oxidizing bacteria at hydrothermal vents
Dimitri V. Meier et al.
ISME JOURNAL (2017)
Superhydrophobic diving flies (Ephydra hians) and the hypersaline waters of Mono Lake
Floris van Breugel et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
The life sulfuric: microbial ecology of sulfur cycling in marine sediments
Kenneth Wasmund et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2017)
Disguised as a Sulfate Reducer: Growth of the Deltaproteobacterium Desulfurivibrio alkaliphilus by Sulfide Oxidation with Nitrate
Casper Thorup et al.
MBIO (2017)
Unique double concentric ring organization of light harvesting complexes in Gemmatimonas phototrophica
Marko Dachev et al.
PLOS BIOLOGY (2017)
Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples
Alma E. Parada et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
Jaime Huerta-Cepas et al.
NUCLEIC ACIDS RESEARCH (2016)
BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences
Minoru Kanehisa et al.
JOURNAL OF MOLECULAR BIOLOGY (2016)
Complete genome sequence of Desulfurivibrio alkaliphilus strain AHT2T, a haloalkaliphilic sulfidogen from Egyptian hypersaline alkaline lakes
Emily Denise Melton et al.
STANDARDS IN GENOMIC SCIENCES (2016)
Metagenomic Insights into the Uncultured Diversity and Physiology of Microbes in Four Hypersaline Soda Lake Brines
Charlotte D. Vavourakis et al.
FRONTIERS IN MICROBIOLOGY (2016)
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
Dinghua Li et al.
BIOINFORMATICS (2015)
Functional microbiology of soda lakes
Dimitry Y. Sorokin et al.
CURRENT OPINION IN MICROBIOLOGY (2015)
Thiosulfate Dehydrogenase (TsdA) from Allochromatium vinosum STRUCTURAL AND FUNCTIONAL INSIGHTS INTO THIOSULFATE OXIDATION
Jose A. Brito et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2015)
Complex archaea that bridge the gap between prokaryotes and eukaryotes
Anja Spang et al.
NATURE (2015)
Anaerobic digestion of the microalga Spirulina at extreme alkaline conditions: biogas production, metagenome, and metatranscriptome
Vímac Nolla-Ardèvol et al.
Frontiers in Microbiology (2015)
Anvi'o: an advanced analysis and visualization platformfor 'omics data
A. Murat Eren et al.
PEERJ (2015)
MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
Dongwan D. Kang et al.
PEERJ (2015)
Phylogenetic and environmental diversity of DsrAB-type dissimilatory (bi) sulfite reductases
Albert Leopold Mueller et al.
ISME Journal (2015)
Methanogenesis at extremely haloalkaline conditions in the soda lakes of Kulunda Steppe (Altai, Russia)
Dimitry Y. Sorokin et al.
FEMS MICROBIOLOGY ECOLOGY (2015)
Microbial diversity and biogeochemical cycling in soda lakes
Dimitry Y. Sorokin et al.
EXTREMOPHILES (2014)
Genome sequencing of a single cell of the widely distributed marine subsurface Dehalococcoidia, phylum Chloroflexi
Kenneth Wasmund et al.
ISME JOURNAL (2014)
Algo-Bacterial Communities of the Kulunda Steppe (Altai Region, Russia) Soda Lakes
O. S. Samylina et al.
MICROBIOLOGY (2014)
Functional type 2 photosynthetic reaction centers found in the rare bacterial phylum Gemmatimonadetes
Yonghui Zeng et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Disproportionation of elemental sulfur by haloalkaliphilic bacteria from soda lakes
Alexander Poser et al.
EXTREMOPHILES (2013)
Analysis of community composition of sulfur-oxidizing bacteria in hypersaline and soda lakes using soxB as a functional molecular marker
Tatjana P. Tourova et al.
FEMS MICROBIOLOGY ECOLOGY (2013)
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Christian Quast et al.
NUCLEIC ACIDS RESEARCH (2013)
SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
Evguenia Kopylova et al.
BIOINFORMATICS (2012)
Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory
Mark J. Chaisson et al.
BMC BIOINFORMATICS (2012)
Thiosulfate dehydrogenase: a widespread unusual acidophilic c-type cytochrome
Kevin Denkmann et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Identification and characterization of a bacterial hydrosulphide ion channel
Bryan K. Czyzewski et al.
NATURE (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Microfossils of sulphur-metabolizing cells in 3.4-billion-year-old rocks of Western Australia
David Wacey et al.
NATURE GEOSCIENCE (2011)
A comparative genomic analysis of energy metabolism in sulfate reducing bacteria and archaea
Ines A. Cardoso Pereira et al.
FRONTIERS IN MICROBIOLOGY (2011)
The microbial sulfur cycle at extremely haloalkaline conditions of soda lakes
Dimitry Y. Sorokin et al.
FRONTIERS IN MICROBIOLOGY (2011)
Prodigal: prokaryotic gene recognition and translation initiation site identification
Doug Hyatt et al.
BMC BIOINFORMATICS (2010)
Sulfidogenesis under extremely haloalkaline conditions in soda lakes of Kulunda Steppe (Altai, Russia)
Dimitry Y. Sorokin et al.
FEMS MICROBIOLOGY ECOLOGY (2010)
Anaerobic Respiration of Elemental Sulfur and Thiosulfate by Shewanella oneidensis MR-1 Requires psrA, a Homolog of the phsA Gene of Salmonella enterica Serovar Typhimurium LT2
Justin L. Burns et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Structural and Functional Insights into Sulfide:Quinone Oxidoreductase
Jose A. Brito et al.
BIOCHEMISTRY (2009)
Thiothrix caldifontis sp nov and Thiothrix lacustris sp nov., gammaproteobacteria isolated from sulfide springs
Elena Chernousova et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Nitriliruptor alkaliphilus gen. nov., sp nov., a deep-lineage haloalkaliphilic actinobacterium from soda lakes capable of growth on aliphatic nitriles, and proposal of Nitriliruptoraceae fam. nov and Nitriliruptorales ord. nov.
Dimitry Yu Sorokin et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Biochemistry and molecular biology of lithotrophic sulfur oxidation by taxonomically and ecologically diverse bacteria and archaea
Wriddhiman Ghosh et al.
FEMS MICROBIOLOGY REVIEWS (2009)
Hydrothermal vents and the origin of life
William Martin et al.
NATURE REVIEWS MICROBIOLOGY (2008)
Bacterial diversity and activity along a salinity gradient in soda lakes of the Kulunda Steppe (Altai, Russia)
Mirjam J. Foti et al.
EXTREMOPHILES (2008)
Thiohalomonas denitrificans gen. nov., sp nov and Thiohalomonas nitratireducens sp nov., novel obligately chemolithoautotrophic, moderately halophilic, thiodenitrifying Gammaproteobacteria from hypersaline habitats
Dimitry Yu Sorokin et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
DNA-DNA hybridization values and their relationship to whole-genome sequence similarities
Johan Goris et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Chemolithotrophic halo alkaliphiles from soda lakes
DY Sorokin et al.
FEMS MICROBIOLOGY ECOLOGY (2005)
Novel genes of the dsr gene cluster and evidence for close interaction of Dsr proteins during sulfur oxidation in the phototrophic sulfur bacterium Allochromatium vinosum
C Dahl et al.
JOURNAL OF BACTERIOLOGY (2005)
Rfam: annotating non-coding RNAs in complete genomes
S Griffiths-Jones et al.
NUCLEIC ACIDS RESEARCH (2005)
Coupling of the pathway of sulphur oxidation to dioxygen reduction:: characterization of a novel membrane-bound thiosulphate:quinone oxidoreductase
FH Müller et al.
MOLECULAR MICROBIOLOGY (2004)
Oxidation of inorganic sulfur compounds by obligately organotrophic bacteria
DY Sorokin
MICROBIOLOGY (2003)
Specificity of respiratory pathways involved in the reduction of sulfur compounds by Salmonella enterica
AP Hinsley et al.
MICROBIOLOGY-SGM (2002)
Oxidation of reduced inorganic sulfur compounds by bacteria: Emergence of a common mechanism?
CG Friedrich et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2001)
Novel genes coding for lithotrophic sulfur oxidation of Paracoccus pantotrophus GB17
CG Friedrich et al.
JOURNAL OF BACTERIOLOGY (2000)
Share Paper
