Journal
BIOCHEMISTRY
Volume 58, Issue 40, Pages 4112-4124Publisher
AMER CHEMICAL SOC
DOI: 10.1021/acs.biochem.9b00593
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Funding
- NSF [MCB 1617019]
- NIH [EY027012, EY027768]
- Oregon State University NMR Facility NIH HEI Grant [1S100D018518]
- M. J. Murdock Charitable Trust [2014162]
- Ophthalmology Proteomics Core NIH [P30 EY010572, S10 OD012246]
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Deamidation is a major age-related modification in the human lens that is highly prevalent in crystallins isolated from the insoluble fraction of cataractous lenses and also causes protein aggregation in vitro. However, the mechanism by which deamidation causes proteins to become insoluble is not known because only subtle structural changes were observed in vitro. We have identified Asn14 and Asn76 of gamma S-crystallin as highly deamidated in insoluble proteins isolated from aged lenses. These sites are on the surface of the N-terminal domain and were mimicked by replacing the Asn with Asp residues in order to generate recombinant human gamma S and deamidated mutants. Both N14D and N76D had increased light scattering compared to wild-type gamma S (WT) and increased aggregation during thermal-induced denaturation. Aggregation was enhanced by oxidized glutathione, suggesting deamidation changes were correlated to changes in protein dynamics determined by NMR spectroscopy. Heteronuclear NMR spectroscopy was used to measure amide hydrogen exchange and N-15 relaxation dynamics to identify regions with increased dynamics compared to gamma S WT. Residue-specific changes in solvent accessibility and dynamics were both near and distant from the sites of deamidation, suggesting that deamidation had both local and global effects on the protein structure at slow (ms to s) and fast (mu s to ps) time scales. Thus, a potential mechanism for gamma S deamidation-induced insolubilization in cataractous lenses is altered dynamics due to local regions of unfolding and increased flexibility in both the N- and C-terminal domains particularly at surface helices. This conformational flexibility increases the likelihood of aggregation, which would be enhanced in the oxidizing cytoplasm of the aged and cataractous lens. The NMR data combined with the in vivo insolubility and in vitro aggregation findings support a model that deamidation drives changes in protein dynamics that facilitate protein aggregation associated with cataracts.
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