4.7 Article

Computational identification of microbial phosphorylation sites by the enhanced characteristics of sequence information

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

PTM-ssMP: A Web Server for Predicting Different Types of Post-translational Modification Sites Using Novel Site-specific Modification Profile

Yu Liu et al.

INTERNATIONAL JOURNAL OF BIOLOGICAL SCIENCES (2018)

Review Biochemistry & Molecular Biology

A Comprehensive Review of In silico Analysis for Protein S-sulfenylation Sites

Md Mehedi Hasan et al.

PROTEIN AND PEPTIDE LETTERS (2018)

Article Genetics & Heredity

DeepNitro: Prediction of Protein Nitration and Nitrosylation Sites by Deep Learning

Yubin Xie et al.

GENOMICS PROTEOMICS & BIOINFORMATICS (2018)

Proceedings Paper Engineering, Biomedical

iLMS, Computational Identification of Lysine-Malonylation Sites by Combining Multiple Sequence Features

Md Mehedi Hasan et al.

PROCEEDINGS 2018 IEEE 18TH INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOENGINEERING (BIBE) (2018)

Article Nanoscience & Nanotechnology

A systematic identification of species-specific protein succinylation sites using joint element features information

Md Mehedi Hasan et al.

INTERNATIONAL JOURNAL OF NANOMEDICINE (2017)

Review Microbiology

Protein phosphorylation and its role in archaeal signal transduction

Dominik Esser et al.

FEMS MICROBIOLOGY REVIEWS (2016)

Article Mathematical & Computational Biology

dbPSP: a curated database for protein phosphorylation sites in prokaryotes

Zhicheng Pan et al.

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2015)

Review Chemistry, Multidisciplinary

Protein Tyrosine Nitration: Biochemical Mechanisms and Structural Basis of Functional Effects

Rafael Radi

ACCOUNTS OF CHEMICAL RESEARCH (2013)

Article Chemistry, Multidisciplinary

Current Chemical Biology Tools for Studying Protein Phosphorylation and Dephosphorylation

Candy H. S. Lu et al.

CHEMISTRY-A EUROPEAN JOURNAL (2012)

Article Biochemistry & Molecular Biology

Proteome-Wide Mapping of the Drosophila Acetylome Demonstrates a High Degree of Conservation of Lysine Acetylation

Brian T. Weinert et al.

SCIENCE SIGNALING (2011)

Article Biochemical Research Methods

CD-HIT Suite: a web server for clustering and comparing biological sequences

Ying Huang et al.

BIOINFORMATICS (2010)

Review Cell Biology

Decoding signalling networks by mass spectrometry-based proteomics

Chunaram Choudhary et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2010)

Review Biochemistry & Molecular Biology

Identification, analysis, and prediction of protein ubiquitination sites

Predrag Radivojac et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2010)

Article Chemistry, Multidisciplinary

Prediction of Integral Membrane Protein Type by Collocated Hydrophobic Amino Acid Pair

Ke Chen et al.

JOURNAL OF COMPUTATIONAL CHEMISTRY (2009)

Article Biochemical Research Methods

NetPhosBac - A predictor for Ser/Thr phosphorylation sites in bacterial proteins

Martin Lee Miller et al.

PROTEOMICS (2009)

Article Biochemical Research Methods

Phosphoproteome analysis of E-coli reveals evolutionary conservation of bacterial Ser/Thr/Tyr phosphorylation

Boris Macek et al.

MOLECULAR & CELLULAR PROTEOMICS (2008)

Article Biochemistry & Molecular Biology

AAindex: amino acid index database, progress report 2008

Shuichi Kawashima et al.

NUCLEIC ACIDS RESEARCH (2008)

Article Biochemical Research Methods

The serine/threonine/tyrosine phosphoproteome of the model bacterium Bacillus subtilis

Boris Macek et al.

MOLECULAR & CELLULAR PROTEOMICS (2007)

Review Microbiology

How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria

Josef Deutscher et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2006)

Article Multidisciplinary Sciences

Global analysis of protein phosphorylation in yeast

J Ptacek et al.

NATURE (2005)

Article Biochemistry & Molecular Biology

The importance of intrinsic disorder for protein phosphorylation

LM Iakoucheva et al.

NUCLEIC ACIDS RESEARCH (2004)

Article Biochemical Research Methods

Data mining in bioinformatics using Weka

E Frank et al.

BIOINFORMATICS (2004)

Article Cell Biology

The origins of protein phosphorylation

P Cohen

NATURE CELL BIOLOGY (2002)