Related references
Note: Only part of the references are listed.Ensembl 2018
Daniel R. Zerbino et al.
NUCLEIC ACIDS RESEARCH (2018)
WormBase 2017: molting into a new stage
Raymond Y. N. Lee et al.
NUCLEIC ACIDS RESEARCH (2018)
The Reactome Pathway Knowledgebase
Antonio Fabregat et al.
NUCLEIC ACIDS RESEARCH (2018)
DrugBank 5.0: a major update to the DrugBank database for 2018
David S. Wishart et al.
NUCLEIC ACIDS RESEARCH (2018)
UniProt: the universal protein knowledgebase (vol 45, pg D158, 2017)
Alexandre Renaux
NUCLEIC ACIDS RESEARCH (2018)
A scored human protein-protein interaction network to catalyze genomic interpretation
Taibo Li et al.
NATURE METHODS (2017)
FlyBase at 25: looking to the future
L. Sian Gramates et al.
NUCLEIC ACIDS RESEARCH (2017)
PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements
Huaiyu Mi et al.
NUCLEIC ACIDS RESEARCH (2017)
The BioGRID interaction database: 2017 update
Andrew Chatr-aryamontri et al.
NUCLEIC ACIDS RESEARCH (2017)
agriGO v2.0: a GO analysis toolkit for the agricultural community, 2017 update
Tian Tian et al.
NUCLEIC ACIDS RESEARCH (2017)
WebGestalt 2017: a more comprehensive, powerful, flexible and interactive gene set enrichment analysis toolkit
Jing Wang et al.
NUCLEIC ACIDS RESEARCH (2017)
Multi-omics enrichment analysis using the GeneTrail2 web service
Daniel Stoeckel et al.
BIOINFORMATICS (2016)
Leveraging Big Data to Transform Target Selection and Drug Discovery
B. Chen et al.
CLINICAL PHARMACOLOGY & THERAPEUTICS (2016)
Impact of outdated gene annotations on pathway enrichment analysis
Lina Wadi et al.
NATURE METHODS (2016)
OmniPath: guidelines and gateway for literature-curated signaling pathway resources
Denes Turei et al.
NATURE METHODS (2016)
Analyzing and interpreting genome data at the network level with ConsensusPathDB
Ralf Herwig et al.
NATURE PROTOCOLS (2016)
Enrichr: a comprehensive gene set enrichment analysis web server 2016 update
Maxim V. Kuleshov et al.
NUCLEIC ACIDS RESEARCH (2016)
g:Profiler-a web server for functional interpretation of gene lists (2016 update)
Juri Reimand et al.
NUCLEIC ACIDS RESEARCH (2016)
Meta- and Orthogonal Integration of Influenza OMICs'' Data Defines a Role for UBR4 in Virus Budding
Shashank Tripathi et al.
CELL HOST & MICROBE (2015)
A Review on Bioinformatics Enrichment Analysis Tools Towards Functional Analysis of High Throughput Gene Set Data
Lu Shi Jing et al.
Current Proteomics (2015)
The promise and peril of chemical probes (vol 11, pg 536, 2015)
Cheryl H. Arrowsmith et al.
NATURE CHEMICAL BIOLOGY (2015)
Pathway and network analysis of cancer genomes
Pau Creixell et al.
NATURE METHODS (2015)
Babelomics 5.0: functional interpretation for new generations of genomic data
Roberto Alonso et al.
NUCLEIC ACIDS RESEARCH (2015)
Single-cell and multivariate approaches in genetic perturbation screens
Prisca Liberali et al.
NATURE REVIEWS GENETICS (2015)
Algorithms and tools for protein-protein interaction networks clustering, with a special focus on population-based stochastic methods
Clara Pizzuti et al.
BIOINFORMATICS (2014)
A Meta-analysis of Lung Cancer Gene Expression Identifies PTK7 as a Survival Gene in Lung Adenocarcinoma
Ron Chen et al.
CANCER RESEARCH (2014)
InterMine: extensive web services for modern biology
Alex Kalderimis et al.
NUCLEIC ACIDS RESEARCH (2014)
Assessing identity, redundancy and confounds in Gene Ontology annotations over time
Jesse Gillis et al.
BIOINFORMATICS (2013)
Meta-analysis methods for genome-wide association studies and beyond
Evangelos Evangelou et al.
NATURE REVIEWS GENETICS (2013)
Saccharomyces Genome Database: the genomics resource of budding yeast
J. Michael Cherry et al.
NUCLEIC ACIDS RESEARCH (2012)
Entrez Gene: gene-centered information at NCBI
Donna Maglott et al.
NUCLEIC ACIDS RESEARCH (2011)
Human host factors required for influenza virus replication
Renate Koenig et al.
NATURE (2010)
Genome-wide RNAi screen identifies human host factors crucial for influenza virus replication
Alexander Karlas et al.
NATURE (2010)
GREAT improves functional interpretation of cis-regulatory regions
Cory Y. McLean et al.
NATURE BIOTECHNOLOGY (2010)
CORUM: the comprehensive resource of mammalian protein complexes-2009
Andreas Ruepp et al.
NUCLEIC ACIDS RESEARCH (2010)
Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation
Daniele Merico et al.
PLOS ONE (2010)
Screening the mammalian extracellular proteome for regulators of embryonic human stem cell pluripotency
Rodolfo Gonzalez et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
The IFITM Proteins Mediate Cellular Resistance to Influenza A H1N1 Virus, West Nile Virus, and Dengue Virus
Abraham L. Brass et al.
CELL (2009)
Circos: An information aesthetic for comparative genomics
Martin Krzywinski et al.
GENOME RESEARCH (2009)
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Da Wei Huang et al.
NATURE PROTOCOLS (2009)
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
Da Wei Huang et al.
NUCLEIC ACIDS RESEARCH (2009)
ToppGene Suite for gene list enrichment analysis and candidate gene prioritization
Jing Chen et al.
NUCLEIC ACIDS RESEARCH (2009)
Host Cell Factors in HIV Replication: Meta-Analysis of Genome-Wide Studies
Frederic D. Bushman et al.
PLOS PATHOGENS (2009)
GOEAST: a web-based software toolkit for Gene Ontology enrichment analysis
Qi Zheng et al.
NUCLEIC ACIDS RESEARCH (2008)
GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists
Pedro Carmona-Saez et al.
GENOME BIOLOGY (2007)
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
A Subramanian et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Ontological analysis of gene expression data: current tools, limitations, and open problems
P Khatri et al.
BIOINFORMATICS (2005)
Java Treeview-extensible visualization of microarray data
AJ Saldanha
BIOINFORMATICS (2004)
GOToolBox: functional analysis of gene datasets based on Gene Ontology
D Martin et al.
GENOME BIOLOGY (2004)
Protein complexes and functional modules in molecular networks
V Spirin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
An automated method for finding molecular complexes in large protein interaction networks
GD Bader et al.
BMC BIOINFORMATICS (2003)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)
GoMiner: a resource for biological interpretation of genomic and proteomic data
BR Zeeberg et al.
GENOME BIOLOGY (2003)
KEGG: Kyoto Encyclopedia of Genes and Genomes
M Kanehisa et al.
NUCLEIC ACIDS RESEARCH (2000)
Share Paper
