Related references
Note: Only part of the references are listed.The nuclear matrix protein HNRNPU maintains 3D genome architecture globally in mouse hepatocytes
Hui Fan et al.
GENOME RESEARCH (2018)
Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus
Sofia A. Quinodoz et al.
CELL (2018)
CRISPR-Mediated Programmable 3D Genome Positioning and Nuclear Organization
Haifeng Wang et al.
CELL (2018)
RNAs as Proximity-Labeling Media for Identifying Nuclear Speckle Positions Relative to the Genome
Weizhong Chen et al.
ISCIENCE (2018)
Quantitative analysis of multilayer organization of proteins and RNA in nuclear speckles at super resolution
Jingyi Fei et al.
JOURNAL OF CELL SCIENCE (2017)
Nuclear speckles: molecular organization, biological function and role in disease
Lukasz Galganski et al.
NUCLEIC ACIDS RESEARCH (2017)
Cohesin Loss Eliminates All Loop Domains
Suhas S. P. Rao et al.
CELL (2017)
Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization
Elphege P. Nora et al.
CELL (2017)
Cajal bodies are linked to genome conformation
Qiuyan Wang et al.
NATURE COMMUNICATIONS (2016)
Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments
Neva C. Durand et al.
CELL SYSTEMS (2016)
Condensin-driven remodelling of X chromosome topology during dosage compensation
Emily Crane et al.
NATURE (2015)
Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes
Adrian L. Sanborn et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
HTSeq-a Python framework to work with high-throughput sequencing data
Simon Anders et al.
BIOINFORMATICS (2015)
Directed evolution of APEX2 for electron microscopy and proximity labeling
Stephanie S. Lam et al.
NATURE METHODS (2015)
HiC-Pro: an optimized and flexible pipeline for Hi-C data processing
Nicolas Servant et al.
GENOME BIOLOGY (2015)
A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping
Suhas S. P. Rao et al.
CELL (2014)
Transcription in the context of the 3D nucleus
Kerstin S. Wendt et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
Daehwan Kim et al.
GENOME BIOLOGY (2013)
Topological domains in mammalian genomes identified by analysis of chromatin interactions
Jesse R. Dixon et al.
NATURE (2012)
Spatial partitioning of the regulatory landscape of the X-inactivation centre
Elphege P. Nora et al.
NATURE (2012)
Identification of cis- and trans-acting factors involved in the localization of MALAT-1 noncoding RNA to nuclear speckles
Ryu Miyagawa et al.
RNA (2012)
Biogenesis and function of nuclear bodies
Yuntao S. Mao et al.
TRENDS IN GENETICS (2011)
Nuclear Speckles
David L. Spector et al.
COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY (2011)
Initial Genomics of the Human Nucleolus
Attila Nemeth et al.
PLOS GENETICS (2010)
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Da Wei Huang et al.
NATURE PROTOCOLS (2009)
Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions
Lars Guelen et al.
NATURE (2008)
A screen for nuclear transcripts identifies two linked noncoding RNAs associated with SC35 splicing domains
John N. Hutchinson et al.
BMC GENOMICS (2007)
Proteomic analysis of interchromatin granule clusters
N Saitoh et al.
MOLECULAR BIOLOGY OF THE CELL (2004)
Share Paper
