4.4 Article

Erythrobacter marisflavi sp. nov., isolated from isolated from estuary water

Publisher

MICROBIOLOGY SOC
DOI: 10.1099/ijsem.0.003510

Keywords

estuary environment; polyphasic taxonomy; novel species; Erythrobacter marisflavi

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Funding

  1. Project on Survey of Indigenous Species of Korea of the National Institute of Biological Resources (NIBR) under the Ministry of Environment (MOE)
  2. Cooperative Research Program for Agriculture Science and Technology Development [PJ013743]
  3. Rural Development Administration, Republic of Korea

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A Gram-stain-negative, aerobic, non-motile and coccoid-, ovoid- or rod-shaped bacterial strain, designated KEM-5(T), was isolated from water sampled at an estuary environment on the Yellow Sea, Republic of Korea. The neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain KEM-5(T) fell within the clade comprising the type strains of Erythrobacter species. Strain KEM-5(T) exhibited 16S rRNA gene sequence similarities of 97.01-97.66% to the type strains of E. rythrobacter citreus, E. rythrobacter seohaensis and E. rythrobacter pelagi and of 94.18-96.95% to the type strains of the other Erythrobacter species. The genomicaverage nucleotide identity values of strain KEM-5(T) with a non-type strain (LAMA 915) of E. citreus and E. seohaensis SW-135(T) were 76.04 and 74.98 %, respectively. Mean DNA-DNA relatedness values between strain KEM-5(T) and the type strains of E. citreus, E. seohaensis and E. pelagi were 10-18 %. Strain KEM-5(T) contained Q-10 as the predominant ubiquinone and C-18:1 omega 7c, summed feature 3 (C-16:1 omega 7c and/or C-16:1 omega 6c), C-16:0 and C-17:1 omega 6c as the major fatty acids. The major polar lipids of strain KEM-5(T) were phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol and sphingoglycolipid. The DNA G+C content of strain KEM-5(T) was 62.4 mol%. Distinguishing phenotypic properties, together with the phylogenetic and genetic distinctiveness, revealed that strain KEM-5(T) is separated from recognized Erythrobacter species. On the basis of the data presented here, strain KEM-5(T) is considered to represent a novel species of the genus Erythrobacter, for which the name Erythrobacter marisflavi sp. nov. is proposed. The type strain is KEM-5(T) (=KACC 19865(T)=KCTC 62896(T)=NBRC 113546).

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