Related references
Note: Only part of the references are listed.mSignatureDB: a database for deciphering mutational signatures in human cancers
Po-Jung Huang et al.
NUCLEIC ACIDS RESEARCH (2018)
VAReporter: variant reporter for cancer research of massive parallel sequencing
Po-Jung Huang et al.
BMC GENOMICS (2018)
Survival of Del17p CLL Depends on Genomic Complexity and Somatic Mutation
Lijian Yu et al.
CLINICAL CANCER RESEARCH (2017)
Clinical Identification of Oncogenic Drivers and Copy-Number Alterations in Pituitary Tumors
Wenya Linda Bi et al.
ENDOCRINOLOGY (2017)
Understanding mutagenesis through delineation of mutational signatures in human cancer
Mia Petljak et al.
CARCINOGENESIS (2016)
Landscape of somatic mutations in 560 breast cancer whole-genome sequences
Serena Nik-Zainal et al.
NATURE (2016)
deconstructSigs: delineating mutational processes in single tumors distinguishes DNA repair deficiencies and patterns of carcinoma evolution
Rachel Rosenthal et al.
GENOME BIOLOGY (2016)
The Ensembl Variant Effect Predictor
William McLaren et al.
GENOME BIOLOGY (2016)
Oncotator: Cancer Variant Annotation Tool
Alex H. Ramos et al.
HUMAN MUTATION (2015)
Choice of transcripts and software has a large effect on variant annotation
Davis J. McCarthy et al.
GENOME MEDICINE (2014)
Mutational heterogeneity in cancer and the search for new cancer-associated genes
Michael S. Lawrence et al.
NATURE (2013)
Integrative Analysis of Complex Cancer Genomics and Clinical Profiles Using the cBioPortal
Jianjiong Gao et al.
SCIENCE SIGNALING (2013)
Mutational landscape of gingivo-buccal oral squamous cell carcinoma reveals new recurrently-mutated genes and molecular subgroups
Arindam Maitra et al.
NATURE COMMUNICATIONS (2013)
Deciphering Signatures of Mutational Processes Operative in Human Cancer
Ludmil B. Alexandrov et al.
CELL REPORTS (2013)
VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
Daniel C. Koboldt et al.
GENOME RESEARCH (2012)
SNPeffect 4.0: on-line prediction of molecular and structural effects of protein-coding variants
Greet De Baets et al.
NUCLEIC ACIDS RESEARCH (2012)
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
Aaron McKenna et al.
GENOME RESEARCH (2010)
ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
Kai Wang et al.
NUCLEIC ACIDS RESEARCH (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Share Paper
