Related references
Note: Only part of the references are listed.IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
I-Min A. Chen et al.
NUCLEIC ACIDS RESEARCH (2019)
A Core Genome Multilocus Sequence Typing Scheme for Enterococcus faecalis
Bernd Neumann et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2019)
Accessing Bioactive Natural Products from the Human Microbiome
Aleksandr Milshteyn et al.
CELL HOST & MICROBE (2018)
Microbiota-activated PPAR-γ signaling inhibits dysbiotic Enterobacteriaceae expansion
Mariana X. Byndloss et al.
SCIENCE (2017)
NOD1 and NOD2: Beyond Peptidoglycan Sensing
A. Marijke Keestra-Gounder et al.
TRENDS IN IMMUNOLOGY (2017)
Locating rearrangement events in a phylogeny based on highly fragmented assemblies
Chunfang Zheng et al.
BMC GENOMICS (2016)
A secreted bacterial peptidoglycan hydrolase enhances tolerance to enteric pathogens
Kavita J. Rangan et al.
SCIENCE (2016)
The Dual NOD1/NOD2 Agonism of Muropeptides Containing a Meso-Diaminopimelic Acid Residue
Yulia A. Dagil et al.
PLOS ONE (2016)
Exploiting a host-commensal interaction to promote intestinal barrier function and enteric pathogen tolerance
Virginia A. Pedicord et al.
SCIENCE IMMUNOLOGY (2016)
Bacteriocin production augments niche competition by enterococci in the mammalian gastrointestinal tract
Sushma Kommineni et al.
NATURE (2015)
Insights into Substrate Specificity of NlpC/P60 Cell Wall Hydrolases Containing Bacterial SH3 Domains
Qingping Xu et al.
MBIO (2015)
An intermolecular binding mechanism involving multiple LysM domains mediates carbohydrate recognition by an endopeptidase
Jaslyn E. M. M. Wong et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2015)
Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile
Charlie G. Buffie et al.
NATURE (2015)
Friend Turned Foe: Evolution of Enterococcal Virulence and Antibiotic Resistance
Daria Van Tyne et al.
ANNUAL REVIEW OF MICROBIOLOGY, VOL 68 (2014)
NOD1 and NOD2: Signaling, Host Defense, and Inflammatory Disease
Roberta Caruso et al.
IMMUNITY (2014)
Structures of a Bifunctional Cell Wall Hydrolase CwlT Containing a Novel Bacterial Lysozyme and an NlpC/P60 DL-Endopeptidase
Qingping Xu et al.
JOURNAL OF MOLECULAR BIOLOGY (2014)
Structure-Guided Functional Characterization of DUF1460 Reveals a Highly Specific NlpC/P60 Amidase Family
Qingping Xu et al.
STRUCTURE (2014)
Structural basis of PcsB-mediated cell separation in Streptococcus pneumoniae
Sergio G. Bartual et al.
NATURE COMMUNICATIONS (2014)
From cells to muropeptide structures in 24 h: Peptidoglycan mapping by UPLC-MS
Daniel Kuehner et al.
SCIENTIFIC REPORTS (2014)
NOD proteins: regulators of inflammation in health and disease
Dana J. Philpott et al.
NATURE REVIEWS IMMUNOLOGY (2014)
Glycan Sequence-Dependent Nod2 Activation Investigated by Using a Chemically Synthesized Bacterial Peptidoglycan Fragment Library
Ning Wang et al.
CHEMBIOCHEM (2013)
Identification of a synthetic muramyl peptide derivative with enhanced Nod2 stimulatory capacity
Stephen J. Rubino et al.
INNATE IMMUNITY (2013)
Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells
Yukihiro Furusawa et al.
NATURE (2013)
Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation
Nicholas Arpaia et al.
NATURE (2013)
The Microbial Metabolites, Short-Chain Fatty Acids, Regulate Colonic Treg Cell Homeostasis
Patrick M. Smith et al.
SCIENCE (2013)
Microbiota-mediated colonization resistance against intestinal pathogens
Charlie G. Buffie et al.
NATURE REVIEWS IMMUNOLOGY (2013)
Modulating immunity as a therapy for bacterial infections
Robert E. W. Hancock et al.
NATURE REVIEWS MICROBIOLOGY (2012)
The rise of the Enterococcus: beyond vancomycin resistance
Cesar A. Arias et al.
NATURE REVIEWS MICROBIOLOGY (2012)
Muramyl Dipeptide Induces NOD2-Dependent Ly6Chigh Monocyte Recruitment to the Lungs and Protects Against Influenza Virus Infection
Francois Coulombe et al.
PLOS ONE (2012)
Synthesis and biological evaluation of sugar-derived chiral nitroimidazoles as potential antimycobacterial agents
G. Mugunthan et al.
CARBOHYDRATE RESEARCH (2011)
Nod2 sensing of lysozyme-digested peptidoglycan promotes macrophage recruitment and clearance of S. pneumoniae colonization in mice
Kimberly M. Davis et al.
JOURNAL OF CLINICAL INVESTIGATION (2011)
The Phenix software for automated determination of macromolecular structures
Paul D. Adams et al.
METHODS (2011)
The Toll-Like Receptor 2 Pathway Establishes Colonization by a Commensal of the Human Microbiota
June L. Round et al.
SCIENCE (2011)
MolProbity: all-atom structure validation for macromolecular crystallography
Vincent B. Chen et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2010)
Structure of the γ-D-glutamyl-L-diamino acid endopeptidase YkfC from Bacillus cereus in complex with L-Ala-γ-D-Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases
Qingping Xu et al.
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS (2010)
High-Quality Draft Genome Sequences of 28 Enterococcus sp Isolates
Kelli L. Palmer et al.
JOURNAL OF BACTERIOLOGY (2010)
ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids
Haim Ashkenazy et al.
NUCLEIC ACIDS RESEARCH (2010)
Structure and Functional Regulation of RipA, a Mycobacterial Enzyme Essential for Daughter Cell Separation
Alessia Ruggiero et al.
STRUCTURE (2010)
Impact of peptidoglycan O-acetylation on autolytic activities of the Enterococcus faecalis N-acetylglucosaminidase AtlA and N-acetylmuramidase AtlB
Aurelie Emirian et al.
FEBS LETTERS (2009)
Structural Basis of Murein Peptide Specificity of a γ-D-Glutamyl-L-Diamino Acid Endopeptidase
Qingping Xu et al.
STRUCTURE (2009)
Synthesis of crosslinked peptidoglycan fragments for investigation of their immunobiological functions
Yukari Fujimoto et al.
TETRAHEDRON LETTERS (2009)
Characterization of the peptidoglycan of vancomycin-susceptible Enterococcus faecium
Gary J. Patti et al.
BIOCHEMISTRY (2008)
Solution NMR structure of the NlpC/P60 domain of lipoprotein Spr from Escherichia coli:: Structural evidence for a novel cysteine peptidase catalytic triad
James M. Aramini et al.
BIOCHEMISTRY (2008)
Phaser crystallographic software
Airlie J. McCoy et al.
JOURNAL OF APPLIED CRYSTALLOGRAPHY (2007)
Extra precision glide: Docking and scoring incorporating a model of hydrophobic enclosure for protein-ligand complexes
Richard A. Friesner et al.
JOURNAL OF MEDICINAL CHEMISTRY (2006)
Accurate prediction of the relative potencies of members of a series of kinase inhibitors using molecular docking and MM-GBSA scoring
Paul D. Lyne et al.
JOURNAL OF MEDICINAL CHEMISTRY (2006)
The peptidoglycan recognition proteins (PGRPs)
Roman Dziarski et al.
GENOME BIOLOGY (2006)
Lactate racemization as a rescue pathway for supplying D-lactate to the cell wall biosynthesis machinery in Lactobacillus plantarum
P Goffin et al.
JOURNAL OF BACTERIOLOGY (2005)
Synthesis of peptidoglycan units with UDP at the anomeric position
T Lioux et al.
COLLECTION OF CZECHOSLOVAK CHEMICAL COMMUNICATIONS (2005)
Glide: A new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy
RA Friesner et al.
JOURNAL OF MEDICINAL CHEMISTRY (2004)
Glide: A new approach for rapid, accurate docking and scoring. 2. Enrichment factors in database screening
TA Halgren et al.
JOURNAL OF MEDICINAL CHEMISTRY (2004)
Coot:: model-building tools for molecular graphics
P Emsley et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2004)
Peptidoglycan molecular requirements allowing detection by Nod1 and Nod2
SE Girardin et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
An Enterococcus faecium secreted antigen, SagA, exhibits broad-spectrum binding to extracellular matrix proteins and a appears essential for E-faecium growth
F Teng et al.
INFECTION AND IMMUNITY (2003)
Nod2 is a general sensor of peptidoglycan through muramyl dipeptide (MDP) detection
SE Girardin et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
Evolutionary history, structural features and biochemical diversity of the NlpC/P60 superfamily of enzymes
V Anantharaman et al.
GENOME BIOLOGY (2003)
A simple model host for identifying Gram-positive virulence factors
DA Garsin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
Share Paper
