4.3 Article

Micromonospora soli sp nov., isolated from rice rhizosphere soil

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SPRINGER
DOI: 10.1007/s10482-016-0651-3

Keywords

Actinobacteria; Micromonospora; Micromonosporaceae; Rice rhizosphere soil

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Funding

  1. King Mongkut's Institute of Technology Research Fund (KReF)
  2. Department of Biology
  3. Actinobacterial Research Unit, Faculty of Science, King Mongkut's Institute of Technology Ladkrabang, Bangkok, Thailand

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An actinomycete strain SL3-70(T) was isolated from a rice field and characterised using a polyphasic approach. The morphological and chemotaxonomical characteristics of strain SL3-70(T) indicate that it belongs to the genus Micromonospora. The phylogenetic analysis of the nearly complete 16S rRNA gene sequence revealed that strain SL3-70(T) is a member of the genus Micromonospora, and is closely related to Micromonospora echinaurantica DSM 43904(T) (99.1 % 16S rRNA gene sequence similarity) and Micromonospora kangleipakensis MBRL 34(T) (98.8 %). DNA-DNA relatedness between strain SL3-70(T) and its relatives ranged from 21.2 % +/- A 0.6 to 38.7 % +/- A 0.4. The results obtained from our study indicate that strain SL3-70(T) represents a novel species of the genus Micromonospora, for which the name Micromonospora soli sp. nov. is proposed. The type strain is SL3-70(T) (=BCC 67268(T); =NBRC 110009(T)).

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