4.8 Article

IEDB-AR: immune epitope database-analysis resource in 2019

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

The Immune Epitope Database (IEDB): 2018 update

Randi Vita et al.

NUCLEIC ACIDS RESEARCH (2019)

Article Biochemical Research Methods

ImmunomeBrowser: a tool to aggregate and visualize complex and heterogeneous epitopes in reference proteins

Sandeep Kumar Dhanda et al.

BIOINFORMATICS (2018)

Article Immunology

Development of a novel clustering tool for linear peptide sequences

Sandeep K. Dhanda et al.

IMMUNOLOGY (2018)

Article Immunology

Predicting HLA CD4 Immunogenicity in Human Populations

Sandeep Kumar Dhanda et al.

FRONTIERS IN IMMUNOLOGY (2018)

Article Biochemistry & Molecular Biology

BepiPred-2.0: improving sequence-based B-cell epitope prediction using conformational epitopes

Martin Closter Jespersen et al.

NUCLEIC ACIDS RESEARCH (2017)

Article Biochemical Research Methods

Gapped sequence alignment using artificial neural networks: application to the MHC class I system

Massimo Andreatta et al.

BIOINFORMATICS (2016)

Article Genetics & Heredity

pVAC-Seq: A genome-guided in silico approach to identifying tumor neoantigens

Jasreet Hundal et al.

GENOME MEDICINE (2016)

Article Biochemistry & Molecular Biology

LYRA, a webserver for lymphocyte receptor structural modeling

Michael Schantz Klausen et al.

NUCLEIC ACIDS RESEARCH (2015)

Article Biochemical Research Methods

MHC-NP: Predicting peptides naturally processed by the MHC

Sebastien Giguere et al.

JOURNAL OF IMMUNOLOGICAL METHODS (2013)

Article Biochemical Research Methods

Properties of MHC Class I Presented Peptides That Enhance Immunogenicity

Jorg J. A. Calis et al.

PLOS COMPUTATIONAL BIOLOGY (2013)

Article Genetics & Heredity

NetMHCcons: a consensus method for the major histocompatibility complex class I predictions

Edita Karosiene et al.

IMMUNOGENETICS (2012)

Article Biochemistry & Molecular Biology

Immune epitope database analysis resource

Yohan Kim et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biochemical Research Methods

Reliable B Cell Epitope Predictions: Impacts of Method Development and Improved Benchmarking

Jens Vindahl Kringelum et al.

PLOS COMPUTATIONAL BIOLOGY (2012)

Article Biochemical Research Methods

Peptide binding predictions for HLA DR, DP and DQ molecules

Peng Wang et al.

BMC BIOINFORMATICS (2010)

Article Biochemical Research Methods

NN-align. An artificial neural network-based alignment algorithm for MHC class II peptide binding prediction

Morten Nielsen et al.

BMC BIOINFORMATICS (2009)

Article Biochemical Research Methods

ElliPro: a new structure-based tool for the prediction of antibody epitopes

Julia Ponomarenko et al.

BMC BIOINFORMATICS (2008)

Article Biochemical Research Methods

Prediction of MHC class II binding affinity using SMM-align, a novel stabilization matrix alignment method

Morten Nielsen et al.

BMC BIOINFORMATICS (2007)

Article Biochemistry & Molecular Biology

Prediction of residues in discontinuous B-cell epitopes using protein 3D structures

Pernille Haste Andersen et al.

PROTEIN SCIENCE (2006)

Article Biotechnology & Applied Microbiology

A consensus epitope prediction approach identifies the breadth of murine TCD8+-cell responses to vaccinia virus

Magdalini Moutaftsi et al.

NATURE BIOTECHNOLOGY (2006)