Related references
Note: Only part of the references are listed.MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization
Kazutaka Katoh et al.
BRIEFINGS IN BIOINFORMATICS (2019)
Silent transmission of an IS1294b-deactivated mcr-1 gene with inducible colistin resistance
Kai Zhou et al.
INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS (2018)
Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center
Alice R. Wattam et al.
NUCLEIC ACIDS RESEARCH (2017)
Sequential induction of Fur-regulated genes in response to iron limitation in Bacillus subtilis
Hualiang Pi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
AfterQC: automatic filtering, trimming, error removing and quality control for fastq data
Shifu Chen et al.
BMC BIOINFORMATICS (2017)
Evolution of E. coli on [U-13C] Glucose Reveals a Negligible Isotopic Influence on Metabolism and Physiology
Troy E. Sandberg et al.
PLOS ONE (2016)
The I-TASSER Suite: protein structure and function prediction
Jianyi Yang et al.
NATURE METHODS (2015)
Deciphering Fur transcriptional regulatory network highlights its complex role beyond iron metabolism in Escherichia coli
Sang Woo Seo et al.
NATURE COMMUNICATIONS (2014)
The role of variable DNA tandem repeats in bacterial adaptation
Kai Zhou et al.
FEMS MICROBIOLOGY REVIEWS (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
The Bacillus subtilis EfeUOB transporter is essential for high-affinity acquisition of ferrous and ferric iron
Marcus Miethke et al.
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH (2013)
Software for Computing and Annotating Genomic Ranges
Michael Lawrence et al.
PLOS COMPUTATIONAL BIOLOGY (2013)
Pseudogenes
Yusuf Tutar
COMPARATIVE AND FUNCTIONAL GENOMICS (2012)
Microbial laboratory evolution in the era of genome-scale science
Tom M. Conrad et al.
MOLECULAR SYSTEMS BIOLOGY (2011)
Confidence intervals that match Fisher's exact or Blaker's exact tests
Michael P. Fay
BIOSTATISTICS (2010)
I-TASSER: a unified platform for automated protein structure and function prediction
Ambrish Roy et al.
NATURE PROTOCOLS (2010)
The Extinction Dynamics of Bacterial Pseudogenes
Chih-Horng Kuo et al.
PLOS GENETICS (2010)
Organised Genome Dynamics in the Escherichia coli Species Results in Highly Diverse Adaptive Paths
Marie Touchon et al.
PLOS GENETICS (2009)
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Ben Langmead et al.
GENOME BIOLOGY (2009)
I-TASSER server for protein 3D structure prediction
Yang Zhang
BMC BIOINFORMATICS (2008)
A new ferrous iron-uptake transporter, EfeU (YcdN), from Escherichia coli
Cornelia Grosse et al.
MOLECULAR MICROBIOLOGY (2006)
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
Tomoya Baba et al.
MOLECULAR SYSTEMS BIOLOGY (2006)
Deletional bias and the evolution of bacterial genomes
A Mira et al.
TRENDS IN GENETICS (2001)
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
KA Datsenko et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)