Journal
VIRUSES-BASEL
Volume 11, Issue 2, Pages -Publisher
MDPI
DOI: 10.3390/v11020110
Keywords
alpha-synuclein; tau; amyloid; prion; prion protein; strain diversity; molecular dynamics simulation; secondary structure prediction; -arch; in-register parallel -sheet
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Funding
- TSUBAME Encouragement Program for Young/Female Users of Global Scientific Information and Computing Center at the Tokyo Institute of Technology
- Initiative on Promotion of Supercomputing for Young or Women Researchers from the Information Technology Center
- University of Tokyo
- Takeda Science Foundation
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The mechanism of prion strain diversity remains unsolved. Investigation of inheritance and diversification of protein-based pathogenic information demands the identification of the detailed structures of abnormal isoforms of the prion protein (PrPSc); however, achieving purification is difficult without affecting infectivity. Similar prion-like properties are recognized also in other disease-associated in-register parallel -sheet amyloids including Tau and -synuclein (Syn) amyloids. Investigations into structures of those amyloids via solid-state nuclear magnetic resonance spectroscopy and cryo-electron microscopy recently made remarkable advances due to their relatively small sizes and lack of post-translational modifications. Herein, we review advances regarding pathogenic amyloids, particularly Tau and Syn, and discuss implications about strain diversity mechanisms of prion/PrPSc from the perspective that PrPSc is an in-register parallel -sheet amyloid. Additionally, we present our recent data of molecular dynamics simulations of Syn amyloid, which suggest significance of compatibility between -sheet propensities of the substrate and local structures of the template for stability of amyloid structures. Detailed structures of Syn and Tau amyloids are excellent models of pathogenic amyloids, including PrPSc, to elucidate strain diversity and pathogenic mechanisms.
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