Related references
Note: Only part of the references are listed.Computational design of orthogonal membrane receptor-effector switches for rewiring signaling pathways
M. Young et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
De novo designed transmembrane peptides activating the α5β1 integrin
Marco Mravic et al.
PROTEIN ENGINEERING DESIGN & SELECTION (2018)
Accurate computational design of multipass transmembrane proteins
Peilong Lu et al.
SCIENCE (2018)
CHARMM-GUI 10 years for biomolecular modeling and simulation
Sunhwan Jo et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2017)
Membranome: a database for proteome-wide analysis of single-pass membrane proteins
Andrei L. Lomize et al.
NUCLEIC ACIDS RESEARCH (2017)
Combination of Cα-H Hydrogen Bonds and van der Waals Packing Modulates the Stability of GxxxG-Mediated Dimers in Membranes
Samantha M. Anderson et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2017)
The accommodation index measures the perturbation associated with insertions and deletions in coiled-coils: Application to understand signaling in histidine kinases
Nathan W. Schmidt et al.
PROTEIN SCIENCE (2017)
Single methyl groups can act as toggle switches to specify transmembrane Protein-protein interactions
Li He et al.
ELIFE (2017)
Steric trapping reveals a cooperativity network in the intramembrane protease GlpG
Ruiqiong Guo et al.
NATURE CHEMICAL BIOLOGY (2016)
A topological and conformational stability alphabet for multipass membrane proteins
Xiang Feng et al.
NATURE CHEMICAL BIOLOGY (2016)
Cholesterol-Induced Lipophobic Interaction between Transmembrane Helices Using Ensemble and Single-Molecule Fluorescence Resonance Energy Transfer
Yoshiaki Yano et al.
BIOCHEMISTRY (2015)
Role of GxxxG Motifs in Transmembrane Domain Interactions
Mark G. Teese et al.
BIOCHEMISTRY (2015)
Mechanisms of Integral Membrane Protein Insertion and Folding
Florian Cymer et al.
JOURNAL OF MOLECULAR BIOLOGY (2015)
The Membrane- and Soluble-Protein Helix-Helix Interactome: Similar Geometry via Different Interactions
Shao-Qing Zhang et al.
STRUCTURE (2015)
Rapid search for tertiary fragments reveals protein sequence-structure relationships
Jianfu Zhou et al.
PROTEIN SCIENCE (2015)
The safety dance: biophysics of membrane protein folding and misfolding in a cellular context
Jonathan P. Schlebach et al.
QUARTERLY REVIEWS OF BIOPHYSICS (2015)
Toward understanding driving forces in membrane protein folding
Heedeok Hong
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2014)
De novo design of a transmembrane Zn2+-transporting four-helix bundle
Nathan H. Joh et al.
SCIENCE (2014)
Computational design of water-soluble α-helical barrels
Andrew R. Thomson et al.
SCIENCE (2014)
High thermodynamic stability of parametrically designed helical bundles
Po-Ssu Huang et al.
SCIENCE (2014)
How good are my data and what is the resolution?
Philip R. Evans et al.
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2013)
Self-interaction of transmembrane helices representing pre-clusters from the human single-span membrane proteins
Jan Kirrbach et al.
BIOINFORMATICS (2013)
Improved Parameters for the Martini Coarse-Grained Protein Force Field
Djurre H. de Jong et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2013)
CHARMM36 all-atom additive protein force field: Validation based on comparison to NMR data
Jing Huang et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2013)
Architectural and thermodynamic principles underlying intramembrane protease function
Rosanna P. Baker et al.
NATURE CHEMICAL BIOLOGY (2012)
iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM
T. Geoff G. Battye et al.
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2011)
Membrane protein folding: how important are hydrogen bonds?
James U. Bowie
CURRENT OPINION IN STRUCTURAL BIOLOGY (2011)
Probing Designability via a Generalized Model of Helical Bundle Geometry
Gevorg Grigoryan et al.
JOURNAL OF MOLECULAR BIOLOGY (2011)
Structural topology of phospholamban pentamer in lipid bilayers by a hybrid solution and solid-state NMR method
Raffaello Verardi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Integration, scaling, space-group assignment and post-refinement
Wolfgang Kabsch
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)
Features and development of Coot
P. Emsley et al.
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)
PHENIX: a comprehensive Python-based system for macromolecular structure solution
Paul D. Adams et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2010)
De Novo Design and Molecular Assembly of a Transmembrane Diporphyrin-Binding Protein Complex
Ivan V. Korendovych et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2010)
Similar Energetic Contributions of Packing in the Core of Membrane and Water-Soluble Proteins
Nathan H. Joh et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)
Structural imperatives impose diverse evolutionary constraints on helical membrane proteins
Amit Oberai et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Interaction and conformational dynamics of membrane-spanning protein helices
Dieter Langosch et al.
PROTEIN SCIENCE (2009)
Molecular dynamics studies on structure and dynamics of phospholamban monomer and pentamer in membranes
Thehoon Kim et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2009)
Modest stabilization by most hydrogen-bonded side-chain interactions in membrane proteins
Nathan HyunJoong Joh et al.
NATURE (2008)
Aromatic and cation-π interactions enhance helix-helix association in a membrane environment
Rachel M. Johnson et al.
BIOCHEMISTRY (2007)
Phaser crystallographic software
Airlie J. McCoy et al.
JOURNAL OF APPLIED CRYSTALLOGRAPHY (2007)
Computational design of peptides that target transmembrane helices
Hang Yin et al.
SCIENCE (2007)
Helix-packing motifs in membrane proteins
R. F. S. Walters et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Polar networks control oligomeric assembly in membranes
CD Tatko et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2006)
OPM: Orientations of proteins in membranes database
MA Lomize et al.
BIOINFORMATICS (2006)
Scaling and assessment of data quality
P Evans
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2006)
The structure of phospholamban pentamer reveals a channel-like architecture in membranes
K Oxenoid et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Missense mutations in transmembrane domains of proteins: Phenotypic propensity of polar residues for human disease
AW Partridge et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2004)
Sequence context modulates the stability of a GxxxG-mediated transmembrane helix-helix dimer
AK Doura et al.
JOURNAL OF MOLECULAR BIOLOGY (2004)
Hydrophobic helical hairpins: Design and packing interactions in membrane environment
RM Johnson et al.
BIOCHEMISTRY (2004)
WebLogo: A sequence logo generator
GE Crooks et al.
GENOME RESEARCH (2004)
Topological stability and self-association of a completely hydrophobic model transmembrane helix in lipid bilayers
Y Yano et al.
BIOCHEMISTRY (2002)
Role of cysteine residues in structural stability and function of a transmembrane helix bundle
CB Karim et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2001)
Helix-helix packing and interfacial pairwise interactions of residues in membrane proteins
L Adamian et al.
JOURNAL OF MOLECULAR BIOLOGY (2001)
The Cα-H•••O hydrogen bond:: A determinant of stability and specificity in transmembrane helix interactions
A Senes et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
Designed heterodimerizing leucine zippers with a range of pIs and stabilities up to 10-15 M
JR Moll et al.
PROTEIN SCIENCE (2001)
Polar residues drive association of polyleucine transmembrane helices
FX Zhou et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
Internal packing of helical membrane proteins
M Eilers et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)