Related references
Note: Only part of the references are listed.The complete genome sequence of Dickeya zeae EC1 reveals substantial divergence from other Dickeya strains and species
Jianuan Zhou et al.
BMC GENOMICS (2015)
Detection of Pantoea stewartii from sweet corn leaves by loop-mediated isothermal amplification (LAMP)
Hiroshi Uematsu et al.
JOURNAL OF GENERAL PLANT PATHOLOGY (2015)
Microbial species delineation using whole genome sequences
Neha J. Varghese et al.
NUCLEIC ACIDS RESEARCH (2015)
Plant pathogenic bacteria in open irrigation systems: what risk for crop health?
J. R. Lamichhane et al.
PLANT PATHOLOGY (2015)
Finding Our Way through Phenotypes
Andrew R. Deans et al.
PLOS BIOLOGY (2015)
Detection, identification and differentiation of Pectobacterium and Dickeya species causing potato blackleg and tuber soft rot: a review
R. Czajkowski et al.
ANNALS OF APPLIED BIOLOGY (2015)
Epidemiology of Dickeya dianthicola and Dickeya solani in ornamental hosts and potato studied using variable number tandem repeat analysis
Neil Parkinson et al.
EUROPEAN JOURNAL OF PLANT PATHOLOGY (2015)
Construction of a genome-scale metabolic network of the plant pathogen Pectobacterium carotovorum provides new strategies for bactericide discovery
Cheng Wang et al.
FEBS LETTERS (2015)
Genomic overview of the phytopathogen Pectobacterium wasabiae strain RNS 08.42.1A suggests horizontal acquisition of quorum-sensing genes
Slimane Khayi et al.
GENETICA (2015)
Simultaneous detection of major blackleg and soft rot bacterial pathogens in potato by multiplex polymerase chain reaction
M. Potrykus et al.
ANNALS OF APPLIED BIOLOGY (2014)
SplitMEM: a graphical algorithm for pan-genome analysis with suffix skips
Shoshana Marcus et al.
BIOINFORMATICS (2014)
Dickeya solani sp nov., a pectinolytic plant-pathogenic bacterium isolated from potato (Solanum tuberosum)
Jan M. van der Wolf et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
MetaRef: a pan-genomic database for comparative and community microbial genomics
Katherine Huang et al.
NUCLEIC ACIDS RESEARCH (2014)
Genetic Diversity of Pectobacterium carotovorum subsp brasiliensis Isolated in Korea
Dong Hwan Lee et al.
PLANT PATHOLOGY JOURNAL (2014)
Bacterial pectate lyases, structural and functional diversity
Nicole Hugouvieux-Cotte-Pattat et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2014)
Seeking the source of Pseudomonas aeruginosa infections in a recently opened hospital: an observational study using whole-genome sequencing
Joshua Quick et al.
BMJ OPEN (2014)
Characterisation of Pectobacterium wasabiae and Pectobacterium carotovorum subsp carotovorum isolates from diseased potato plants in Finland
M. Pasanen et al.
ANNALS OF APPLIED BIOLOGY (2013)
Genotype-phenotype matching analysis of 38 Lactococcus lactis strains using random forest methods
Jumamurat R. Bayjanov et al.
BMC MICROBIOLOGY (2013)
Non-phenotypic tests to detect and characterize antibiotic resistance mechanisms in Enterobacteriaceae
Agnese Lupo et al.
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE (2013)
Characterisation of pectobacterium wasabiae causing blackleg and soft rot diseases in South Africa
Lucy N. Moleleki et al.
EUROPEAN JOURNAL OF PLANT PATHOLOGY (2013)
Phylogeny and classification of Dickeya based on multilocus sequence analysis
Glorimar Marrero et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2013)
Phylogenetic conservatism of functional traits in microorganisms
Adam C. Martiny et al.
ISME JOURNAL (2013)
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
Morgan G. I. Langille et al.
NATURE BIOTECHNOLOGY (2013)
Detection of phytopathogens of the genus Dickeya using a PCR primer prediction pipeline for draft bacterial genome sequences
L. Pritchard et al.
PLANT PATHOLOGY (2013)
Pathogenicity of and plant immunity to soft rot pectobacteria
Par R. Davidsson et al.
FRONTIERS IN PLANT SCIENCE (2013)
Draft Genome Sequences of 17 Isolates of the Plant Pathogenic Bacterium Dickeya
Leighton Pritchard et al.
GENOME ANNOUNCEMENTS (2013)
Draft Genome Sequences of Four Dickeya dianthicola and Four Dickeya solani Strains
Leighton Pritchard et al.
GENOME ANNOUNCEMENTS (2013)
PGAP: pan-genomes analysis pipeline
Yongbing Zhao et al.
BIOINFORMATICS (2012)
Top 10 plant pathogenic bacteria in molecular plant pathology
John Mansfield et al.
MOLECULAR PLANT PATHOLOGY (2012)
Alignment-Free Design of Highly Discriminatory Diagnostic Primer Sets for Escherichia coli O104:H4 Outbreak Strains
Leighton Pritchard et al.
PLOS ONE (2012)
Revised Phylogeny and Novel Horizontally Acquired Virulence Determinants of the Model Soft Rot Phytopathogen Pectobacterium wasabiae SCC3193
Johanna Nykyri et al.
PLOS PATHOGENS (2012)
The evolution of metabolic networks of E. coli
David J. Baumler et al.
BMC SYSTEMS BIOLOGY (2011)
Characterization of Pectobacterium species from Iran using biochemical and molecular methods
Sareh Baghaee-Ravari et al.
EUROPEAN JOURNAL OF PLANT PATHOLOGY (2011)
Harvesting Evolutionary Signals in a Forest of Prokaryotic Gene Trees
Klaus Schliep et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
Open-Source Genomic Analysis of Shiga-Toxin-Producing E. coli O104:H4
Holger Rohde et al.
NEW ENGLAND JOURNAL OF MEDICINE (2011)
Dickeya species: an emerging problem for potato production in Europe
I. K. Toth et al.
PLANT PATHOLOGY (2011)
Genome-scale diversity and niche adaptation analysis of Lactococcus lactis by comparative genome hybridization using multi-strain arrays
Roland J. Siezen et al.
MICROBIAL BIOTECHNOLOGY (2011)
Pseudomonas genomes: diverse and adaptable
Mark W. Silby et al.
FEMS MICROBIOLOGY REVIEWS (2011)
The Tree and Net Components of Prokaryote Evolution
Pere Puigbo et al.
GENOME BIOLOGY AND EVOLUTION (2010)
Evolutionary Dynamics of Complete Campylobacter Pan-Genomes and the Bacterial Species Concept
Tristan Lefebure et al.
GENOME BIOLOGY AND EVOLUTION (2010)
Phylogeny of Gammaproteobacteria
Kelly P. Williams et al.
JOURNAL OF BACTERIOLOGY (2010)
Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer
Talima Pearson et al.
BMC BIOLOGY (2009)
Bacterial Evolution by Genomic Island Transfer Occurs via DNA Transformation In Planta
Helen C. Lovell et al.
CURRENT BIOLOGY (2009)
Horizontal gene transfer: sustaining pathogenicity and optimizing host-pathogen interactions
Clarence I. Kado
MOLECULAR PLANT PATHOLOGY (2009)
Sequencing the species pan-genome
Stephen Bentley
NATURE REVIEWS MICROBIOLOGY (2009)
Shifting the genomic gold standard for the prokaryotic species definition
Michael Richter et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Biochemical and genetic diversity of pectolytic enterobacteria causing soft rot disease of potatoes in New Zealand
Andrew R. Pitman et al.
AUSTRALASIAN PLANT PATHOLOGY (2008)
Comparative genomics: the bacterial pan-genome
Herve Tettelin et al.
CURRENT OPINION IN MICROBIOLOGY (2008)
The pangenome structure of Escherichia coli:: Comparative genomic analysis of E-coli commensal and pathogenic isolates
David A. Rasko et al.
JOURNAL OF BACTERIOLOGY (2008)
Quorum sensing coordinates brute force and stealth modes of infection in the plant pathogen Pectobacterium atrosepticum
Hui Liu et al.
PLOS PATHOGENS (2008)
DNA-DNA hybridization values and their relationship to whole-genome sequence similarities
Johan Goris et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Host range and molecular Phylogenies of the soft rot enterobacterial genera Pectobacterium and dickeya
Bing Ma et al.
PHYTOPATHOLOGY (2007)
Statistical strategies for avoiding false discoveries in metabolomics and related experiments
David I. Broadhurst et al.
METABOLOMICS (2006)
Transfer of Pectobacterium chrysanthemi (Burkholder et al. 1953) Brenner et al. 1973 and Brenneria paradisiaca to the genus Dickeya gen. nov as Dickeya chrysanthemi comb. nov and Dickeya paradisiaca comb. nov and delineation of four novel species, Dickeya dadantii sp nov., Dickeya dianthicola sp nov., Dickeya dieffenbachiae sp nov and Dickeya zeae sp nov.
R Samson et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
The net of life: Reconstructing the microbial phylogenetic network
V Kunin et al.
GENOME RESEARCH (2005)
Neighbor-Net: An agglomerative method for the construction of phylogenetic networks
D Bryant et al.
MOLECULAR BIOLOGY AND EVOLUTION (2004)
Characterization of atypical Erwinia carotovora strains causing blackleg of potato in Brazil
V Duarte et al.
JOURNAL OF APPLIED MICROBIOLOGY (2004)
Elevation of three subspecies of Pectobacterium carotovorum to species level:: Pectobacterium atrosepticum sp nov., Pectobacterium betavasculorum sp nov and Pectobacterium wasabiae sp nov.
L Gardan et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2003)
Share Paper
