4.8 Article

Chromatin regulation by Histone H4 acetylation at Lysine 16 during cell death and differentiation in the myeloid compartment

Journal

NUCLEIC ACIDS RESEARCH
Volume 47, Issue 10, Pages 5016-5037

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/nar/gkz195

Keywords

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Funding

  1. Plan Nacional de I+D+I [PI15/00892, PI18/01527, PI16/01318, PI14/01244]
  2. ISCIII-Subdireccion General de Evaluaciccion y Fomento de la Investigacion
  3. Plan Nacional de I+D+I 2008-2011/FEDER [CP11/00131]
  4. IUOPA
  5. Fundacion Cientifica de la AECC
  6. Ministry of Economy and Competitiveness Juan de la Cierva postdoctoral fellowships [FJCI-2015-26965, IJCI-2015-23316]
  7. Fundacion Ramon Areces
  8. FICYT
  9. Asturias Regional Government [GRUPIN14-052]
  10. Gobierno del Principado de Asturias, PCTI-Plan de Ciencia, Tecnologia e Innovacion [IDI/2018/146, IDI/2018/144]
  11. Deutsche Forschungsgemeinschaft (DFG) [SFB960]
  12. European Research Council [CoG-2014-646903]
  13. Spanish Ministry of Economy and Competitiveness [SAF-SAF2013-43065]
  14. Asociacion Espanola Contra el Cancerr [AECC-CI-2015]
  15. FERO Foundation
  16. ISCIII [PI14-01191]
  17. Obra Social La Caixa-Fundacio Josep Carreras
  18. Generalitat de Catalunya [SGR330]
  19. Obra Social Liberbank-Cajastur, Spain

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Histone H4 acetylation at Lysine 16 (H4K16ac) is a key epigenetic mark involved in gene regulation, DNA repair and chromatin remodeling, and though it is known to be essential for embryonic development, its role during adult life is still poorly understood. Here we show that this lysine is massively hyperacetylated in peripheral neutrophils. Genome-wide mapping of H4K16ac in terminally differentiated blood cells, along with functional experiments, supported a role for this histone post-translational modification in the regulation of cell differentiation and apoptosis in the hematopoietic system. Furthermore, in neutrophils, H4K16ac was enriched at specific DNA repeats. These DNA regions presented an accessible chromatin conformation and were associated with the cleavage sites that generate the 50 kb DNA fragments during the first stages of programmed cell death. Our results thus suggest that H4K16ac plays a dual role in myeloid cells as it not only regulates differentiation and apoptosis, but it also exhibits a non-canonical structural role in poising chromatin for cleavage at an early stage of neutrophil cell death.

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