4.5 Article

Phase separation of ligand-activated enhancers licenses cooperative chromosomal enhancer assembly

Related references

Note: Only part of the references are listed.
Review Biochemistry & Molecular Biology

A Solid-State Conceptualization of Information Transfer from Gene to Message to Protein

Masato Kato et al.

ANNUAL REVIEW OF BIOCHEMISTRY, VOL 87 (2018)

Article Biochemistry & Molecular Biology

Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus

Sofia A. Quinodoz et al.

Article Multidisciplinary Sciences

Coactivator condensation at super-enhancers links phase separation and gene control

Benjamin R. Sabari et al.

SCIENCE (2018)

Review Biochemistry & Molecular Biology

Multiple Modes of Protein-Protein Interactions Promote RNP Granule Assembly

Tanja Mittag et al.

JOURNAL OF MOLECULAR BIOLOGY (2018)

Review Biochemistry & Molecular Biology

Methods for Physical Characterization of Phase-Separated Bodies and Membrane-less Organelles

Diana M. Mitrea et al.

JOURNAL OF MOLECULAR BIOLOGY (2018)

Article Multidisciplinary Sciences

Phase-separation mechanism for C-terminal hyperphosphorylation of RNA polymerase II

Huasong Lu et al.

NATURE (2018)

Article Biochemistry & Molecular Biology

RNA polymerase II clustering through carboxy-terminal domain phase separation

Marc Boehning et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2018)

Article Biochemistry & Molecular Biology

Liquid Nuclear Condensates Mechanically Sense and Restructure the Genome

Yongdae Shin et al.

Editorial Material Genetics & Heredity

Capturing condensin in chromosomes

Tatsuya Hirano

NATURE GENETICS (2017)

Review Cell Biology

The code and beyond: transcription regulation by the RNA polymerase II carboxy-terminal domain

Kevin M. Harlen et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2017)

Review Cell Biology

Biomolecular condensates: organizers of cellular biochemistry

Salman F. Banani et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2017)

Review Multidisciplinary Sciences

Liquid phase condensation in cell physiology and disease

Yongdae Shin et al.

SCIENCE (2017)

Article Multidisciplinary Sciences

Oligomerization and ATP stimulate condensin-mediated DNA compaction

Ross A. Keenholtz et al.

SCIENTIFIC REPORTS (2017)

Article Biochemistry & Molecular Biology

Cancer-Specific Retargeting of BAF Complexes by a Prion-like Domain

Gaylor Boulay et al.

Article Chemistry, Multidisciplinary

Reentrant Phase Transition Drives Dynamic Substructure Formation in Ribonucleoprotein Droplets

Priya R. Banerjee et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2017)

Review Biochemistry & Molecular Biology

A Phase Separation Model for Transcriptional Control

Denes Hnisz et al.

Article Biochemistry & Molecular Biology

Spatiotemporal Control of Intracellular Phase Transitions Using Light-Activated optoDroplets

Yongdae Shin et al.

Review Biochemistry & Molecular Biology

Ever-Changing Landscapes: Transcriptional Enhancers in Development and Evolution

Hannah K. Long et al.

Review Cell Biology

Phase separation in biology; functional organization of a higher order

Diana M. Mitrea et al.

CELL COMMUNICATION AND SIGNALING (2016)

Article Cell & Tissue Engineering

3D Chromosome Regulatory Landscape of Human Pluripotent Cells

Xiong Ji et al.

CELL STEM CELL (2016)

Article Biochemistry & Molecular Biology

Higher-order oligomerization promotes localization of SPOP to liquid nuclear speckles

Melissa R. Marzahn et al.

EMBO JOURNAL (2016)

Article Genetics & Heredity

Hierarchy within the mammary STAT5-driven Wap super-enhancer

Ha Youn Shin et al.

NATURE GENETICS (2016)

Review Genetics & Heredity

Enhancers as non-coding RNA transcription units: recent insights and future perspectives

Wenbo Li et al.

NATURE REVIEWS GENETICS (2016)

Article Biochemistry & Molecular Biology

A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation

Avinash Patel et al.

Article Biochemistry & Molecular Biology

TNFα Signaling Exposes Latent Estrogen Receptor Binding Sites to Alter the Breast Cancer Cell Transcriptome

Hector L. Franco et al.

MOLECULAR CELL (2015)

Article Biochemistry & Molecular Biology

Condensin I and II Complexes License Full Estrogen Receptor α-Dependent Enhancer Activation

Wenbo Li et al.

MOLECULAR CELL (2015)

Article Biochemistry & Molecular Biology

Formation and Maturation of Phase-Separated Liquid Droplets by RNA-Binding Proteins

Yuan Lin et al.

MOLECULAR CELL (2015)

Article Biochemistry & Molecular Biology

Phase Transition of a Disordered Nuage Protein Generates Environmentally Responsive Membraneless Organelles

Timothy J. Nott et al.

MOLECULAR CELL (2015)

Article Multidisciplinary Sciences

Condensin-driven remodelling of X chromosome topology during dosage compensation

Emily Crane et al.

NATURE (2015)

Article Multidisciplinary Sciences

RNA transcribed from a distal enhancer is required for activating the chromatin at the promoter of the gonadotropin α-subunit gene

Lilach Pnueli et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Article Multidisciplinary Sciences

The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics

Shana Elbaum-Garfinkle et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Article Biochemistry & Molecular Biology

Enhancer Activation Requires trans-Recruitment of a Mega Transcription Factor Complex

Zhijie Liu et al.

Article Cell Biology

Enhancer RNAs: the new molecules of transcription

Fan Lai et al.

CURRENT OPINION IN GENETICS & DEVELOPMENT (2014)

Article Multidisciplinary Sciences

Required enhancer-matrin-3 network interactions for a homeodomain transcription program

Dorota Skowronska-Krawczyk et al.

NATURE (2014)

Article Biochemistry & Molecular Biology

Selective Inhibition of Tumor Oncogenes by Disruption of Super-Enhancers

Jakob Loven et al.

Article Biochemistry & Molecular Biology

Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes

Warren A. Whyte et al.

Article Biochemistry & Molecular Biology

Interactome Maps of Mouse Gene Regulatory Domains Reveal Basic Principles of Transcriptional Regulation

Kyong-Rim Kieffer-Kwon et al.

Article Biochemistry & Molecular Biology

Enhancer transcripts mark active estrogen receptor binding sites

Nasun Hah et al.

GENOME RESEARCH (2013)

Article Biochemistry & Molecular Biology

Genome-wide Analysis Reveals SR Protein Cooperation and Competition in Regulated Splicing

Shatakshi Pandit et al.

MOLECULAR CELL (2013)

Article Biochemistry & Molecular Biology

Remodeling of the Enhancer Landscape during Macrophage Activation Is Coupled to Enhancer Transcription

Minna U. Kaikkonen et al.

MOLECULAR CELL (2013)

Article Multidisciplinary Sciences

Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variants

Stephen C. J. Parker et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Review Cell Biology

Intrinsic disorder in cell signaling and gene transcription

Agnes Tantos et al.

MOLECULAR AND CELLULAR ENDOCRINOLOGY (2012)

Article Biochemical Research Methods

Fiji: an open-source platform for biological-image analysis

Johannes Schindelin et al.

NATURE METHODS (2012)

Review Biochemistry & Molecular Biology

Functional and Mechanistic Diversity of Distal Transcription Enhancers

Michael Bulger et al.

Article Multidisciplinary Sciences

Active liquid-like behavior of nucleoli determines their size and shape in Xenopus laevis oocytes

Clifford P. Brangwynne et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Multidisciplinary Sciences

Widespread transcription at neuronal activity-regulated enhancers

Tae-Kyung Kim et al.

NATURE (2010)

Review Genetics & Heredity

Condensin and cohesin complexity: the expanding repertoire of functions

Andrew J. Wood et al.

NATURE REVIEWS GENETICS (2010)

Article Cell Biology

Identification of cis-acting sites for condensin loading onto budding yeast chromosomes

Claudio D'Ambrosio et al.

GENES & DEVELOPMENT (2008)

Review Cell Biology

Intrinsically unstructured proteins and their functions

HJ Dyson et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2005)