Related references
Note: Only part of the references are listed.Emerging Resistance to Empiric Antimicrobial Regimens for Pediatric Bloodstream Infections in Malawi (1998-2017)
Pui-Ying Iroh Tam et al.
CLINICAL INFECTIOUS DISEASES (2019)
Molecular epidemiology of Klebsiella pneumoniae invasive infections over a decade at Kilifi County Hospital in Kenya
Sonal P. Henson et al.
INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY (2017)
Genomic landscape of extended-spectrum β-lactamase resistance in Escherichia coli from an urban African setting
Patrick Musicha et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2017)
Trends in antimicrobial resistance in bloodstream infection isolates at a large urban hospital in Malawi (1998-2016): a surveillance study
Patrick Musicha et al.
LANCET INFECTIOUS DISEASES (2017)
Evolution and Epidemiology of Multidrug-Resistant Klebsiella pneumoniae in the United Kingdom and Ireland
Danesh Moradigaravand et al.
MBIO (2017)
The spread of KPC-producing Enterobacteriaceae in Spain: WGS analysis of the emerging high-risk clones of Klebsiella pneumoniae ST11/KPC-2, ST101/KPC-2 and ST512/KPC-3
Jesus Oteo et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2016)
Klebsiella pneumoniae Population Genomics and Antimicrobial-Resistant Clones
Kelly L. Wyres et al.
TRENDS IN MICROBIOLOGY (2016)
Roary: rapid large-scale prokaryote pan genome analysis
Andrew J. Page et al.
BIOINFORMATICS (2015)
A high-resolution genomic analysis of multidrug-resistant hospital outbreaks of Klebsiella pneumoniae
Hao Chung The et al.
EMBO MOLECULAR MEDICINE (2015)
The changing epidemiology of hospital outbreaks due to ESBL-producing Klebsiella pneumoniae: the CTX-M-15 type consolidation
Esther Calbo et al.
FUTURE MICROBIOLOGY (2015)
Extensive Capsule Locus Variation and Large-Scale Genomic Recombination within the Klebsiella pneumoniae Clonal Group 258
Kelly L. Wyres et al.
GENOME BIOLOGY AND EVOLUTION (2015)
Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health
Kathryn E. Holt et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Differential contribution of AcrAB and OqxAB efflux pumps to multidrug resistance and virulence in Klebsiella pneumoniae
Suzanne Bialek-Davenet et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2015)
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Nicholas J. Croucher et al.
NUCLEIC ACIDS RESEARCH (2015)
Genomic Analysis of the Emergence and Rapid Global Dissemination of the Clonal Group 258 Klebsiella pneumoniae Pandemic
Jolene R. Bowers et al.
PLOS ONE (2015)
Molecular characterisation and epidemiological investigation of an outbreak of blaOXA-181 carbapenemase-producing isolates of Klebsiella pneumoniae in South Africa
R. K. Jacobson et al.
SAMJ SOUTH AFRICAN MEDICAL JOURNAL (2015)
In Silico Detection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing
Alessandra Carattoli et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2014)
Prokka: rapid prokaryotic genome annotation
Torsten Seemann
BIOINFORMATICS (2014)
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Alexandros Stamatakis
BIOINFORMATICS (2014)
Bloodstream infections and antimicrobial resistance patterns in a South African neonatal intensive care unit
G. Morkel et al.
PAEDIATRICS AND INTERNATIONAL CHILD HEALTH (2014)
Predominance of Klebsiella pneumoniae ST14 carrying CTX-M-15 causing neonatal sepsis in Tanzania
Stephen E. Mshana et al.
BMC INFECTIOUS DISEASES (2013)
Klebsiella pneumoniae resistant to third-generation cephalosporins in five African and two Vietnamese major towns: multiclonal population structure with two major international clonal groups, CG15 and CG258
S. Breurec et al.
CLINICAL MICROBIOLOGY AND INFECTION (2013)
Clinical relevance of the ESKAPE pathogens
Jack N. Pendleton et al.
EXPERT REVIEW OF ANTI-INFECTIVE THERAPY (2013)
Identification of acquired antimicrobial resistance genes
Ea Zankari et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2012)
Detection of recombination events in bacterial genomes from large population samples
Pekka Marttinen et al.
NUCLEIC ACIDS RESEARCH (2012)
Multiresistant Gram-negative bacteria: the role of high-risk clones in the dissemination of antibiotic resistance
Neil Woodford et al.
FEMS MICROBIOLOGY REVIEWS (2011)
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
Daniel R. Zerbino et al.
GENOME RESEARCH (2008)
Bayesian analysis of population structure based on linked molecular information
Jukka Corander et al.
MATHEMATICAL BIOSCIENCES (2007)
ACT: the Artemis comparison tool
TJ Carver et al.
BIOINFORMATICS (2005)