Related references
Note: Only part of the references are listed.ColoWeb: a resource for analysis of colocalization of genomic features
RyangGuk Kim et al.
BMC GENOMICS (2015)
Genome-wide study of correlations between genomic features and their relationship with the regulation of gene expression
Yuri V. Kravatsky et al.
DNA RESEARCH (2015)
i-cisTarget 2015 update: generalized cis-regulatory enrichment analysis in human, mouse and fly
Hana Imrichova et al.
NUCLEIC ACIDS RESEARCH (2015)
Epigenome Mapping Reveals Distinct Modes of Gene Regulation and Widespread Enhancer Reprogramming by the Oncogenic Fusion Protein EWS-FLI1
Eleni M. Tomazou et al.
CELL REPORTS (2015)
Single-Cell DNA Methylome Sequencing and Bioinformatic Inference of Epigenomic Cell-State Dynamics
Matthias Farlik et al.
CELL REPORTS (2015)
genomation: a toolkit to summarize, annotate and visualize genomic intervals
Altuna Akalin et al.
BIOINFORMATICS (2015)
CODEX: a next-generation sequencing experiment database for the haematopoietic and embryonic stem cell communities
Manuel Sanchez-Castillo et al.
NUCLEIC ACIDS RESEARCH (2015)
Integrative analysis of public ChIP-seq experiments reveals a complex multi-cell regulatory landscape
Aurelien Griffon et al.
NUCLEIC ACIDS RESEARCH (2015)
Comprehensive analysis of DNA methylation data with RnBeads
Yassen Assenov et al.
NATURE METHODS (2014)
Relating genes to function: identifying enriched transcription factors using the ENCODE ChIP-Seq significance tool
Raymond K. Auerbach et al.
BIOINFORMATICS (2013)
Patterns of regulatory activity across diverse human cell types predict tissue identity, transcription factor binding, and long-range interactions
Nathan C. Sheffield et al.
GENOME RESEARCH (2013)
The Genomic HyperBrowser: an analysis web server for genome-scale data
Geir K. Sandve et al.
NUCLEIC ACIDS RESEARCH (2013)
Software for Computing and Annotating Genomic Ranges
Michael Lawrence et al.
PLOS COMPUTATIONAL BIOLOGY (2013)
DNA Methylation Dynamics during In Vivo Differentiation of Blood and Skin Stem Cells
Christoph Bock et al.
MOLECULAR CELL (2012)
Exploring Massive, Genome Scale Datasets with the GenometriCorr Package
Alexander Favorov et al.
PLOS COMPUTATIONAL BIOLOGY (2012)
Ten Years of Pathway Analysis: Current Approaches and Outstanding Challenges
Purvesh Khatri et al.
PLOS COMPUTATIONAL BIOLOGY (2012)
GREAT improves functional interpretation of cis-regulatory regions
Cory Y. McLean et al.
NATURE BIOTECHNOLOGY (2010)
EpiGRAPH: user-friendly software for statistical analysis and prediction of (epi)genomic data
Christoph Bock et al.
GENOME BIOLOGY (2009)
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
A Subramanian et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)