Related references
Note: Only part of the references are listed.Computational algorithms to predict Gene Ontology annotations
Pietro Pinoli et al.
BMC BIOINFORMATICS (2015)
Gene Ontology Consortium: going forward
J. A. Blake et al.
NUCLEIC ACIDS RESEARCH (2015)
Human RecQ Helicases in DNA Repair, Recombination, and Replication
Deborah L. Croteau et al.
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 83 (2014)
Inferring gene ontologies from pairwise similarity data
Michael Kramer et al.
BIOINFORMATICS (2014)
Integration of molecular network data reconstructs Gene Ontology
Vladimir Gligorijevic et al.
BIOINFORMATICS (2014)
NeXO Web: the NeXO ontology database and visualization platform
Janusz Dutkowski et al.
NUCLEIC ACIDS RESEARCH (2014)
YeastNet v3: a public database of data-specific and integrated functional gene networks for Saccharomyces cerevisiae
Hanhae Kim et al.
NUCLEIC ACIDS RESEARCH (2014)
Ddc2 Mediates Mec1 Activation through a Ddc1- or Dpb11-Independent Mechanism
Amitava Bandhu et al.
PLOS GENETICS (2014)
TermGenie - a web-application for pattern-based ontology class generation
Heiko Dietze et al.
JOURNAL OF BIOMEDICAL SEMANTICS (2014)
Novel semantic similarity measure improves an integrative approach to predicting gene functional associations
Fatemeh Vafaee et al.
BMC SYSTEMS BIOLOGY (2013)
A gene ontology inferred from molecular networks
Janusz Dutkowski et al.
NATURE BIOTECHNOLOGY (2013)
A large-scale evaluation of computational protein function prediction
Predrag Radivojac et al.
NATURE METHODS (2013)
Ontology Learning from Text: A Look Back and into the Future
Wilson Wong et al.
ACM COMPUTING SURVEYS (2012)
Chapter 9: Analyses Using Disease Ontologies
Nigam H. Shah et al.
PLOS COMPUTATIONAL BIOLOGY (2012)
Quality of Computationally Inferred Gene Ontology Annotations
Nives Skunca et al.
PLOS COMPUTATIONAL BIOLOGY (2012)
Resolving the structure of interactomes with hierarchical agglomerative clustering
Yongjin Park et al.
BMC BIOINFORMATICS (2011)
The BioGRID Interaction Database: 2011 update
Chris Stark et al.
NUCLEIC ACIDS RESEARCH (2011)
The DNA Damage Response: Making It Safe to Play with Knives
Alberto Ciccia et al.
MOLECULAR CELL (2010)
Rational association of genes with traits using a genome-scale gene network for Arabidopsis thaliana
Insuk Lee et al.
NATURE BIOTECHNOLOGY (2010)
The Genetic Landscape of a Cell
Michael Costanzo et al.
SCIENCE (2010)
Gene Ontology Analysis of GWA Study Data Sets Provides Insights into the Biology of Bipolar Disorder
Peter Holmans et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2009)
Implementation of GenePattern within the Stanford Microarray Database
Jeremy Hubble et al.
NUCLEIC ACIDS RESEARCH (2009)
An Improved, Bias-Reduced Probabilistic Functional Gene Network of Baker's Yeast, Saccharomyces cerevisiae
Insuk Lee et al.
PLOS ONE (2007)
OBO-Edit - an ontology editor for biologists
John Day-Richter et al.
BIOINFORMATICS (2007)
Role of the C terminus of Mec1 checkpoint kinase in its localization to sites of DNA damage
D Nakada et al.
MOLECULAR BIOLOGY OF THE CELL (2005)
A general framework for weighted gene co-expression network analysis
Bin Zhang et al.
STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY (2005)
Requirement of the Mre11 complex and exonuclease 1 for activation of the Mec1 signaling pathway
D Nakada et al.
MOLECULAR AND CELLULAR BIOLOGY (2004)
Molecular mechanisms of mammalian DNA repair and the DNA damage checkpoints
A Sancar et al.
ANNUAL REVIEW OF BIOCHEMISTRY (2004)
Sensing DNA damage through ATRIP recognition of RPA-ssDNA complexes
L Zou et al.
SCIENCE (2003)
Community structure in social and biological networks
M Girvan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)