Related references
Note: Only part of the references are listed.Propionibacterium acnes Abundance Correlates Inversely with Staphylococcus aureus: Data from Atopic Dermatitis Skin Microbiome
Wojciech Francuzik et al.
ACTA DERMATO-VENEREOLOGICA (2018)
Bacterial microbiota of the nasal passages across the span of human life
Lindsey Bomar et al.
CURRENT OPINION IN MICROBIOLOGY (2018)
Taxonomy annotation and guide tree errors in 16S rRNA databases
Robert Edgar
PEERJ (2018)
Antimicrobials from human skin commensal bacteria protect against Staphylococcus aureus and are deficient in atopic dermatitis
Teruaki Nakatsuji et al.
SCIENCE TRANSLATIONAL MEDICINE (2017)
Severe infections emerge from commensal bacteria by adaptive evolution
Bernadette C. Young et al.
ELIFE (2017)
Determination of nasal and oropharyngeal microbiomes in a multicenter population-based study - findings from Pretest 1 of the German National Cohort
Manas K. Akmatov et al.
SCIENTIFIC REPORTS (2017)
Coagulase-Negative Staphylococcal Strain Prevents Staphylococcus aureus Colonization and Skin Infection by Blocking Quorum Sensing
Alexandra E. Paharik et al.
CELL HOST & MICROBE (2017)
The culturome of the human nose habitats reveals individual bacterial fingerprint patterns
Ursula Kaspar et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation
Nuala A. O'Leary et al.
NUCLEIC ACIDS RESEARCH (2016)
The Microbiome and the Respiratory Tract
Robert P. Dickson et al.
ANNUAL REVIEW OF PHYSIOLOGY, VOL 78 (2016)
Lawsonella clevelandensis gen. nov., sp nov., a new member of the suborder Corynebacterineae isolated from human abscesses
Melissa E. Bell et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2016)
Re-evaluation of the taxonomy of the Mitis group of the genus Streptococcus based on whole genome phylogenetic analyses, and proposed reclassification of Streptococcus dentisani as Streptococcus oralis subsp dentisani comb. nov., Streptococcus tigurinus as Streptococcus oralis subsp tigurinus comb. nov., and Streptococcus oligofermentans as a later synonym of Streptococcus cristatus
Anders Jensen et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2016)
The natural history of cutaneous propionibacteria, and reclassification of selected species within the genus Propionibacterium to the proposed novel genera Acidipropionibacterium gen. nov., Cutibacterium gen. nov and Pseudopropionibacterium gen. nov.
Christian F. P. Scholz et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2016)
Staphylococcus aureus vaccines: Deviating from the carol
Dominique Missiakas et al.
JOURNAL OF EXPERIMENTAL MEDICINE (2016)
Skin Microbiome Surveys Are Strongly Influenced by Experimental Design
Jacquelyn S. Meisel et al.
JOURNAL OF INVESTIGATIVE DERMATOLOGY (2016)
Human commensals producing a novel antibiotic impair pathogen colonization
Alexander Zipperer et al.
NATURE (2016)
DADA2: High-resolution sample inference from Illumina amplicon data
Benjamin J. Callahan et al.
NATURE METHODS (2016)
Commensal-Pathogen Interactions along the Human Nasal Passages
Silvio D. Brugger et al.
PLOS PATHOGENS (2016)
High Frequency and Diversity of Antimicrobial Activities Produced by Nasal Staphylococcus Strains against Bacterial Competitors
Daniela Janek et al.
PLOS PATHOGENS (2016)
Individuality, Stability, and Variability of the Plaque Microbiome
Daniel R. Utter et al.
FRONTIERS IN MICROBIOLOGY (2016)
Culture of previously uncultured members of the human gut microbiota by culturomics
Jean-Christophe Lagier et al.
NATURE MICROBIOLOGY (2016)
JBrowse: a dynamic web platform for genome visualization and analysis
Robert Buels et al.
GENOME BIOLOGY (2016)
Staphylococcus aureus and the ecology of the nasal microbiome
Cindy M. Liu et al.
SCIENCE ADVANCES (2015)
Minimum entropy decomposition: Unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences
A. Murat Eren et al.
ISME JOURNAL (2015)
Complete Genome Sequences for Two Strains of a Novel Fastidious, Partially Acid-Fast, Gram-Positive Corynebacterineae Bacterium, Derived from Human Clinical Samples
Ainsley C. Nicholson et al.
GENOME ANNOUNCEMENTS (2015)
RECENT DEVELOPMENTS FOR STAPHYLOCOCCUS AUREUS VACCINES: CLINICAL AND BASIC SCIENCE CHALLENGES
R. A. Proctor
EUROPEAN CELLS & MATERIALS (2015)
Comparing the anterior nare bacterial community of two discrete human populations using Illumina amplicon sequencing
Amelia Camarinha-Silva et al.
ENVIRONMENTAL MICROBIOLOGY (2014)
Biogeography and individuality shape function in the human skin metagenome
Julia Oh et al.
NATURE (2014)
Ribosomal Database Project: data and tools for high throughput rRNA analysis
James R. Cole et al.
NUCLEIC ACIDS RESEARCH (2014)
The SILVA and All-species Living Tree Project (LTP) taxonomic frameworks
Pelin Yilmaz et al.
NUCLEIC ACIDS RESEARCH (2014)
Oligotyping analysis of the human oral microbiome
A. Murat Eren et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Dynamics of tongue microbial communities with single-nucleotide resolution using oligotyping
Jessica L. Mark Welch et al.
FRONTIERS IN MICROBIOLOGY (2014)
Characterization of the nasopharyngeal microbiota in health and during rhinovirus challenge
E. Kaitlynn Allen et al.
MICROBIOME (2014)
The microbiome of chronic rhinosinusitis: culture, molecular diagnostics and biofilm detection
Sam Boase et al.
BMC INFECTIOUS DISEASES (2013)
The altered landscape of the human skin microbiome in patients with primary immunodeficiencies
Julia Oh et al.
GENOME RESEARCH (2013)
Novel Fastidious, Partially Acid-Fast, Anaerobic Gram-Positive Bacillus Associated with Abscess Formation and Recovered from Multiple Medical Centers
S. M. Harrington et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2013)
Topographic diversity of fungal and bacterial communities in human skin
Keisha Findley et al.
NATURE (2013)
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Christian Quast et al.
NUCLEIC ACIDS RESEARCH (2013)
PhyloPhlAn is a new method for improved phylogenetic and taxonomic placement of microbes
Nicola Segata et al.
NATURE COMMUNICATIONS (2013)
National Burden of Invasive Methicillin-Resistant Staphylococcus aureus Infections, United States, 2011
Raymund Dantes et al.
JAMA INTERNAL MEDICINE (2013)
Temporal shifts in the skin microbiome associated with disease flares and treatment in children with atopic dermatitis
Heidi H. Kong et al.
GENOME RESEARCH (2012)
Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys
Jeffrey J. Werner et al.
ISME JOURNAL (2012)
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
Daniel McDonald et al.
ISME JOURNAL (2012)
A framework for human microbiome research
Barbara A. Methe et al.
NATURE (2012)
Structure, function and diversity of the healthy human microbiome
Curtis Huttenhower et al.
NATURE (2012)
The Most Wanted'' Taxa from the Human Microbiome for Whole Genome Sequencing
Anthony A. Fodor et al.
PLOS ONE (2012)
Species-Level Analysis of DNA Sequence Data from the NIH Human Microbiome Project
Sean Conlan et al.
PLOS ONE (2012)
Shifts in human skin and nares microbiota of healthy children and adults
Julia Oh et al.
GENOME MEDICINE (2012)
Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities
Christopher J. van der Gast et al.
ISME JOURNAL (2011)
Microbial Communities of the Upper Respiratory Tract and Otitis Media in Children
Alison S. Laufer et al.
MBIO (2011)
PyNAST: a flexible tool for aligning sequences to a template alignment
J. Gregory Caporaso et al.
BIOINFORMATICS (2010)
Endotracheal tube biofilm inoculation of oral flora and subsequent colonization of opportunistic pathogens
Sarah D. Perkins et al.
INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY (2010)
The Human Oral Microbiome
Floyd E. Dewhirst et al.
JOURNAL OF BACTERIOLOGY (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
Preventing Surgical-Site Infections in Nasal Carriers of Staphylococcus aureus
Lonneke G. M. Bode et al.
NEW ENGLAND JOURNAL OF MEDICINE (2010)
FastTree 2-Approximately Maximum-Likelihood Trees for Large Alignments
Morgan N. Price et al.
PLOS ONE (2010)
The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information
Tsute Chen et al.
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2010)
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Topographical and Temporal Diversity of the Human Skin Microbiome
Elizabeth A. Grice et al.
SCIENCE (2009)
Detection of anaerobic bacteria in high numbers in sputum from patients with cystic fibrosis
Michael M. Tunney et al.
AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE (2008)
Changes in the prevalence of nasal colonization with Staphylococcus aureus in the United States, 2001-2004
Rachel J. Gorwitz et al.
JOURNAL OF INFECTIOUS DISEASES (2008)
Molecular identification of bacteria in bronchoalveolar lavage fluid from children with cystic fibrosis
J. Kirk Harris et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
Qiong Wang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
Loss of bacterial diversity during antibiotic treatment of intubated patients colonized with Pseudomonas aeruginosa
J. L. Flanagan et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2007)
A detailed analysis of 16S ribosomal RNA gene segments for the diagnosis of pathogenic bacteria
Soumitesh Chakravorty et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2007)
Bacterial biota in reflux esophagitis and Barrett's esophagus
Zhiheng Pei et al.
WORLD JOURNAL OF GASTROENTEROLOGY (2005)
The role of nasal carriage in Staphylococcus aureus infections
HFL Wertheim et al.
LANCET INFECTIOUS DISEASES (2005)
Bacterial biota in the human distal esophagus
ZH Pei et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
rpoB gene sequencing for identification of Corynebacterium species
A Khamis et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2004)
Resident aerobic microbiota of the adult human nasal cavity
TT Rasmussen et al.
APMIS (2000)
Share Paper
