4.6 Article

Remarkable problem-solving ability of unicellular amoeboid organism and its mechanism

Journal

ROYAL SOCIETY OPEN SCIENCE
Volume 5, Issue 12, Pages -

Publisher

ROYAL SOC
DOI: 10.1098/rsos.180396

Keywords

amoeba computing; bioinspired computing; natural computing; travelling salesman problem; Physarum

Funding

  1. KAKENHI [22700322]
  2. PRESTO-JST 'Innovative nano-electronics through interdisciplinary collaboration among material, device and system layers' [13416898, JPMJPR1321]
  3. Implementation of cross-cutting technology development project for promoting Internet of Things (IoT)
  4. Grants-in-Aid for Scientific Research [22700322] Funding Source: KAKEN

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Choosing a better move correctly and quickly is a fundamental skill of living organisms that corresponds to solving a computationally demanding problem. A unicellular plasmodium of Physarum polycephalum searches for a solution to the travelling salesman problem (TSP) by changing its shape to minimize the risk of being exposed to aversive light stimuli. In our previous studies, we reported the results on the eight-city TSP solution. In this study, we show that the time taken by plasmodium to find a reasonably high-quality TSP solution grows linearly as the problem size increases from four to eight. Interestingly, the quality of the solution does not degrade despite the explosive expansion of the search space. Formulating a computational model, we show that the linear-time solution can be achieved if the intrinsic dynamics could allocate intracellular resources to grow the plasmodium terminals with a constant rate, even while responding to the stimuli. These results may lead to the development of novel analogue computers enabling approximate solutions of complex optimization problems in linear time.

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