Related references
Note: Only part of the references are listed.Renewing Felsenstein's phylogenetic bootstrap in the era of big data
F. Lemoine et al.
NATURE (2018)
Redox state-dependent modulation of plant SnRK1 kinase activity differs from AMPK regulation in animals
Bernhard Wurzinger et al.
FEBS LETTERS (2017)
Phosphatases Generate Signal Specificity Downstream of Ssp1 Kinase in Fission Yeast
Lin Deng et al.
MOLECULAR AND CELLULAR BIOLOGY (2017)
Probing the global kinome and phosphoproteome in Chlamydomonas reinhardtii via sequential enrichment and quantitative proteomics
Emily G. Werth et al.
PLANT JOURNAL (2017)
Transcriptional Engineering of Microalgae: Prospects for High-Value Chemicals
Amit K. Bajhaiya et al.
TRENDS IN BIOTECHNOLOGY (2017)
DELAY OF GERMINATION1 requires PP2C phosphatases of the ABA signalling pathway to control seed dormancy
Guillaume Nee et al.
NATURE COMMUNICATIONS (2017)
Quantitative in vivo phosphoproteomics reveals reversible signaling processes during nitrogen starvation and recovery in the biofuel model organism Chlamydomonas reinhardtii
Valentin Roustan et al.
BIOTECHNOLOGY FOR BIOFUELS (2017)
Draft Nuclear Genome Sequence of the Halophilic and Beta-Carotene-Accumulating Green Alga Dunaliella salina Strain CCAP19/18
Juergen E. W. Polle et al.
GENOME ANNOUNCEMENTS (2017)
Shaping plant development through the SnRK1-TOR metabolic regulators
Elena Baena-Gonzalez et al.
CURRENT OPINION IN PLANT BIOLOGY (2017)
ChlamyNET: a Chlamydomonas gene co-expression network reveals global properties of the transcriptome and the early setup of key co-expression patterns in the green lineage
Francisco J. Romero-Campero et al.
BMC GENOMICS (2016)
An evolutionary perspective of AMPK-TOR signaling in the three domains of life
Valentin Roustan et al.
JOURNAL OF EXPERIMENTAL BOTANY (2016)
iTAK: A Program for Genome-wide Prediction and Classification of Plant Transcription Factors, Transcriptional Regulators, and Protein Kinases
Yi Zheng et al.
MOLECULAR PLANT (2016)
Quantitative phosphoproteomics reveals the role of the AMPK plant ortholog SnRK1 as a metabolic master regulator under energy deprivation
Ella Nukarinen et al.
SCIENTIFIC REPORTS (2016)
A Review on the Assessment of Stress Conditions for Simultaneous Production of Microalgal Lipids and Carotenoids
Amritpreet K. Minhas et al.
FRONTIERS IN MICROBIOLOGY (2016)
Functional differences between AMPK α1 and α2 subunits in osteogenesis, osteoblast-associated induction of osteoclastogenesis, and adipogenesis
Yu-gang Wang et al.
SCIENTIFIC REPORTS (2016)
Rapid Phosphoproteomic Effects of Abscisic Acid (ABA) on Wild-Type and ABA Receptor-Deficient A-thaliana Mutants
Benjamin B. Minkoff et al.
MOLECULAR & CELLULAR PROTEOMICS (2015)
TCS: a web server for multiple sequence alignment evaluation and phylogenetic reconstruction
Jia-Ming Chang et al.
NUCLEIC ACIDS RESEARCH (2015)
The BioMart community portal: an innovative alternative to large, centralized data repositories
Damian Smedley et al.
NUCLEIC ACIDS RESEARCH (2015)
Relevance of nutrient media composition for hydrogen production in Chlamydomonas
David Gonzalez-Ballester et al.
PHOTOSYNTHESIS RESEARCH (2015)
Phytohormones in microalgae: a new opportunity for microalgal biotechnology?
Yandu Lu et al.
TRENDS IN PLANT SCIENCE (2015)
Algal omics: unlocking bioproduct diversity in algae cell factories
Michael T. Guarnieri et al.
PHOTOSYNTHESIS RESEARCH (2015)
STRING v10: protein-protein interaction networks, integrated over the tree of life
Damian Szklarczyk et al.
NUCLEIC ACIDS RESEARCH (2015)
System-level network analysis of nitrogen starvation and recovery in Chlamydomonas reinhardtii reveals potential new targets for increased lipid accumulation
Luis Valledor et al.
BIOTECHNOLOGY FOR BIOFUELS (2014)
AlgaePath: comprehensive analysis of metabolic pathways using transcript abundance data from next-generation sequencing in green algae
Han-Qin Zheng et al.
BMC GENOMICS (2014)
The sucrosetrehalose 6-phosphate (Tre6P) nexus: specificity and mechanisms of sucrose signalling by Tre6P
Umesh Prasad Yadav et al.
JOURNAL OF EXPERIMENTAL BOTANY (2014)
The Global Phosphoproteome of Chlamydomonas reinhardtii Reveals Complex Organellar Phosphorylation in the Flagella and Thylakoid Membrane
Hongxia Wang et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
Enhancement of extraplastidic oil synthesis in Chlamydomonas reinhardtii using a type-2 diacylglycerol acyltransferase with a phosphorus starvation-inducible promoter
Masako Iwai et al.
PLANT BIOTECHNOLOGY JOURNAL (2014)
A universal protocol for the combined isolation of metabolites, DNA, long RNAs, small RNAs, and proteins from plants and microorganisms
Luis Valledor et al.
PLANT JOURNAL (2014)
Ancient signals: comparative genomics of green plant CDPKs
Louis-Philippe Hamel et al.
TRENDS IN PLANT SCIENCE (2014)
Responsibility of regulatory gene expression and repressed protein synthesis for triacylglycerol accumulation on sulfur-starvation in Chlamydomonas reinhardtii
Atsushi Sato et al.
FRONTIERS IN PLANT SCIENCE (2014)
Assessment of environmental stresses for enhanced microalgal biofuel production - an overview
Dan Cheng et al.
FRONTIERS IN ENERGY RESEARCH (2014)
The Salt Overly Sensitive (SOS) Pathway: Established and Emerging Roles
Hongtao Ji et al.
MOLECULAR PLANT (2013)
Differential effects of nitrogen and sulfur deprivation on growth and biodiesel feedstock production of Chlamydomonas reinhardtii
Turgay Cakmak et al.
BIOTECHNOLOGY AND BIOENGINEERING (2012)
TAG, You're it! Chlamydomonas as a reference organism for understanding algal triacylglycerol accumulation
Sabeeha S. Merchant et al.
CURRENT OPINION IN BIOTECHNOLOGY (2012)
Sensing nutrient and energy status by SnRK1 and TOR kinases
Christophe Robaglia et al.
CURRENT OPINION IN PLANT BIOLOGY (2012)
Impact of Oxidative Stress on Ascorbate Biosynthesis in Chlamydomonas via Regulation of the VTC2 Gene Encoding a GDP-L-galactose Phosphorylase
Eugen I. Urzica et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2012)
Expression of a heterologous SnRK1 in tomato increases carbon assimilation, nitrogen uptake and modifies fruit development
Xinliang Wang et al.
JOURNAL OF PLANT PHYSIOLOGY (2012)
Phytozome: a comparative platform for green plant genomics
David M. Goodstein et al.
NUCLEIC ACIDS RESEARCH (2012)
Transcriptome-Wide Changes in Chlamydomonas reinhardtii Gene Expression Regulated by Carbon Dioxide and the CO2-Concentrating Mechanism Regulator CIA5/CCM1
Wei Fang et al.
PLANT CELL (2012)
Diversity, classification and function of the plant protein kinase superfamily
Melissa D. Lehti-Shiu et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2012)
SINGLET OXYGEN RESISTANT 1 links reactive electrophile signaling to singlet oxygen acclimation in Chlamydomonas reinhardtii
Beat B. Fischer et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
AMPK functions as an adenylate charge-regulated protein kinase
Jonathan S. Oakhill et al.
TRENDS IN ENDOCRINOLOGY AND METABOLISM (2012)
Evolution of Abscisic Acid Synthesis and Signaling Mechanisms
Felix Hauser et al.
CURRENT BIOLOGY (2011)
The sucrose non-fermenting-1-related (SnRK) family of protein kinases: potential for manipulation to improve stress tolerance and increase yield
Patricia Coello et al.
JOURNAL OF EXPERIMENTAL BOTANY (2011)
SnRK2 Protein Kinases-Key Regulators of Plant Response to Abiotic Stresses
Anna Kulik et al.
OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY (2011)
Arabidopsis decuple mutant reveals the importance of SnRK2 kinases in osmotic stress responses in vivo
Hiroaki Fujii et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Duplicability of self-interacting human genes
Asa Perez-Bercoff et al.
BMC EVOLUTIONARY BIOLOGY (2010)
Genetic Engineering of Algae for Enhanced Biofuel Production
Randor Radakovits et al.
EUKARYOTIC CELL (2010)
Cloning and characterization of a SnRK1-encoding gene from Malus hupehensis Rehd. and heterologous expression in tomato
Guangjie Li et al.
MOLECULAR BIOLOGY REPORTS (2010)
The gene balance hypothesis: implications for gene regulation, quantitative traits and evolution
James A. Birchler et al.
NEW PHYTOLOGIST (2010)
The Chlorella variabilis NC64A Genome Reveals Adaptation to Photosymbiosis, Coevolution with Viruses, and Cryptic Sex
Guillaume Blanc et al.
PLANT CELL (2010)
RNA-Seq Analysis of Sulfur-Deprived Chlamydomonas Cells Reveals Aspects of Acclimation Critical for Cell Survival
David Gonzalez-Ballester et al.
PLANT CELL (2010)
Phospho-site mapping, genetic and in planta activation studies reveal key aspects of the different phosphorylation mechanisms involved in activation of SnRK2s
Florina Vlad et al.
PLANT JOURNAL (2010)
Characterization of the β-Carotene Hydroxylase Gene DSM2 Conferring Drought and Oxidative Stress Resistance by Increasing Xanthophylls and Abscisic Acid Synthesis in Rice
Hao Du et al.
PLANT PHYSIOLOGY (2010)
Changes in Transcript Abundance in Chlamydomonas reinhardtii following Nitrogen Deprivation Predict Diversion of Metabolism
Rachel Miller et al.
PLANT PHYSIOLOGY (2010)
Overexpression of a Common Wheat Gene TaSnRK2.8 Enhances Tolerance to Drought, Salt and Low Temperature in Arabidopsis
Hongying Zhang et al.
PLOS ONE (2010)
Genomic Analysis of Organismal Complexity in the Multicellular Green Alga Volvox carteri
Simon E. Prochnik et al.
SCIENCE (2010)
LKB1 and AMP-activated protein kinase control of mTOR signalling and growth
R. J. Shaw
ACTA PHYSIOLOGICA (2009)
Snf1-related protein kinases (SnRKs) act within an intricate network that links metabolic and stress signalling in plants
Nigel G. Halford et al.
BIOCHEMICAL JOURNAL (2009)
The abscisic acid receptor PYR1 in complex with abscisic acid
Julia Santiago et al.
NATURE (2009)
Structural insights into the mechanism of abscisic acid signaling by PYL proteins
Ping Yin et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2009)
SnRK1 (SNF1-related kinase 1) has a central role in sugar and ABA signalling in Arabidopsis thaliana
Mathieu Jossier et al.
PLANT JOURNAL (2009)
SnRK1 Isoforms AKIN10 and AKIN11 Are Differentially Regulated in Arabidopsis Plants under Phosphate Starvation
Selene Fragoso et al.
PLANT PHYSIOLOGY (2009)
Arabidopsis Protein Kinases GRIK1 and GRIK2 Specifically Activate SnRK1 by Phosphorylating Its Activation Loop
Wei Shen et al.
PLANT PHYSIOLOGY (2009)
Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis
Sergio de la Fuente van Bentem et al.
JOURNAL OF PROTEOME RESEARCH (2008)
The central role of a SNRK2 kinase in sulfur deprivation responses
David Gonzalez-Ballester et al.
PLANT PHYSIOLOGY (2008)
Convergent energy and stress signaling
Elena Baena-Gonzalez et al.
TRENDS IN PLANT SCIENCE (2008)
TOR signaling is a determinant of cell survival in response to DNA damage
Changxian Shen et al.
MOLECULAR AND CELLULAR BIOLOGY (2007)
AMP-activated/SNF1 protein kinases: conserved guardians of cellular energy
D. Grahame Hardie
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2007)
The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation
Brian Palenik et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Phosphoproteomic identification of targets of the Arabidopsis sucrose nonfermenting-like kinase SnRK2.8 reveals a connection to metabolic processes
Ryoung Shin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Different phosphorylation mechanisms are involved in the activation of sucrose non-fermenting 1 related protein kinases 2 by osmotic stresses and abscisic acid
Marie Boudsocq et al.
PLANT MOLECULAR BIOLOGY (2007)
qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data
Jan Hellemans et al.
GENOME BIOLOGY (2007)
SNF1/AMPK/SnRK1 kinases, global regulators at the heart of energy control?
Cecile Polge et al.
TRENDS IN PLANT SCIENCE (2007)
Identification of features regulating OST1 kinase activity and OST1 function in guard cells
Christophe Belin et al.
PLANT PHYSIOLOGY (2006)
The stress kinase gene MtSK1 in Medicago truncatula with particular reference to somatic embryogenesis
Kim E. Nolan et al.
PLANT CELL REPORTS (2006)
The regulatory domain of SRK2E/OST1/SnRK2.6 interacts with ABI1 and integrates abscisic acid (ABA) and osmotic stress signals controlling stomatal closure in Arabidopsis
R Yoshida et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
M-Coffee: combining multiple sequence alignment methods with T-Coffee
IM Wallace et al.
NUCLEIC ACIDS RESEARCH (2006)
Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors
Y Kobayashi et al.
PLANT JOURNAL (2005)
PHYML Online - a web server for fast maximum likelihood-based phylogenetic inference
S Guindon et al.
NUCLEIC ACIDS RESEARCH (2005)
A gene expression map of Arabidopsis thaliana development
M Schmid et al.
NATURE GENETICS (2005)
Differential activation of the rice sucrose nonfermenting1-related protein kinase2 family by hyperosmotic stress and abscisic acid
Y Kobayashi et al.
PLANT CELL (2004)
Highly conserved protein kinases involved in the regulation of carbon and amino acid metabolism
NG Halford et al.
JOURNAL OF EXPERIMENTAL BOTANY (2004)
Starvation, osmotic stress and desiccation tolerance lead to expression of different genes of the regulatory beta and gamma subunits of the SnRK1 complex in germinating seeds of Medicago truncatula
J Buitink et al.
PLANT CELL AND ENVIRONMENT (2004)
Induction of tolerance to oxidative stress in the green alga, Chlamydomonas reinhardtii, by abscisic acid
K Yoshida et al.
PLANT CELL AND ENVIRONMENT (2003)
Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1
AV Gendrel et al.
SCIENCE (2002)
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
Jo Vandesompele et al.
GENOME BIOLOGY (2002)
InterProScan - an integration platform for the signature-recognition methods in InterPro
EM Zdobnov et al.
BIOINFORMATICS (2001)
SKP1-SnRK protein kinase interactions mediate proteasomal binding of a plant SCF ubiquitin ligase
R Farrás et al.
EMBO JOURNAL (2001)
Coiled coils: a highly versatile protein folding motif
P Burkhard et al.
TRENDS IN CELL BIOLOGY (2001)
Domain fusion between SNF1-related kinase subunits during plant evolution
V Lumbreras et al.
EMBO REPORTS (2001)
Acclimation of Chlamydomonas reinhardtii to its nutrient environment
A Grossman
PROTIST (2000)
Functional identification of an Arabidopsis Snf4 ortholog by screening for heterologous multicopy suppressors of snf4 deficiency in yeast
T Kleinow et al.
PLANT JOURNAL (2000)
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
J Castresana
MOLECULAR BIOLOGY AND EVOLUTION (2000)