Related references
Note: Only part of the references are listed.Profiling long noncoding RNA of multi-tissue transcriptome enhances porcine noncoding genome annotation
Pengju Zhao et al.
EPIGENOMICS (2018)
Non-coding RNAs as regulators in epigenetics
Jian-Wei Wei et al.
ONCOLOGY REPORTS (2017)
Identification of non-coding and coding RNAs in porcine endometrium
Yueying Wang et al.
GENOMICS (2017)
DNA methylation directly downregulates human cathelicidin antimicrobial peptide gene (CAMP) promoter activity
Xi Chen et al.
ONCOTARGET (2017)
Systematic Identification and Molecular Characteristics of Long Noncoding RNAs in Pig Tissues
Yalan Yang et al.
BIOMED RESEARCH INTERNATIONAL (2017)
Transcriptome Analysis Reveals Long Intergenic Noncoding RNAs Contributed to Growth and Meat Quality Differences between Yorkshire and Wannanhua Pig
Cheng Zou et al.
GENES (2017)
Genome-wide discovery of long intergenic noncoding RNAs and their epigenetic signatures in the rat
Aimin Li et al.
SCIENTIFIC REPORTS (2017)
RELT family members activate p38 and induce apoptosis by a mechanism distinct from TNFR1
Pachai Moua et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2017)
Molecular microevolution and epigenetic patterns of the long non-coding gene H19 show its potential function in pig domestication and breed divergence
Cencen Li et al.
BMC EVOLUTIONARY BIOLOGY (2016)
Recipient C6 rs9200 genotype is associated with hepatocellular carcinoma recurrence after orthotopic liver transplantation in a Han Chinese population
Z. Wang et al.
CANCER GENE THERAPY (2016)
A peptide encoded by a transcript annotated as long noncoding RNA enhances SERCA activity in muscle
Benjamin R. Nelson et al.
SCIENCE (2016)
A Comprehensive Characterization of the Function of LincRNAs in Transcriptional Regulation Through Long-Range Chromatin Interactions
Liuyang Cai et al.
SCIENTIFIC REPORTS (2016)
Genome-wide analysis of DNA methylation in obese, lean, and miniature pig breeds
Yalan Yang et al.
SCIENTIFIC REPORTS (2016)
Systematic Identification and Characterization of Long Non-Coding RNAs in the Silkworm, Bombyx mori
Yuqian Wu et al.
PLOS ONE (2016)
Adult porcine genome-wide DNA methylation patterns support pigs as a biomedical model
Kyle M. Schachtschneider et al.
BMC GENOMICS (2015)
Divergent actions of long noncoding RNAs on X-chromosome remodelling in mammals and Drosophila achieve the same end result: dosage compensation
Subhash C. Lakhotia
JOURNAL OF GENETICS (2015)
Adaptation and possible ancient interspecies introgression in pigs identified by whole-genome sequencing
Huashui Ai et al.
NATURE GENETICS (2015)
DNA methylation signatures of long intergenic noncoding RNAs in porcine adipose and muscle tissues
Zhong-Yin Zhou et al.
SCIENTIFIC REPORTS (2015)
HTSeq-a Python framework to work with high-throughput sequencing data
Simon Anders et al.
BIOINFORMATICS (2015)
Systematic identification and characterization of long intergenic non-coding RNAs in fetal porcine skeletal muscle development
Weimin Zhao et al.
SCIENTIFIC REPORTS (2015)
Genome-wide scans to detect positive selection in Large White and Tongcheng pigs
Xiuling Li et al.
ANIMAL GENETICS (2014)
A genome-wide scan for signatures of selection in Chinese indigenous and commercial pig breeds
Songbai Yang et al.
BMC GENETICS (2014)
Genome-Wide Identification of Long Intergenic Noncoding RNA Genes and Their Potential Association with Domestication in Pigs
Zhong-Yin Zhou et al.
GENOME BIOLOGY AND EVOLUTION (2014)
Mining the pig genome to investigate the domestication process
S. E. Ramos-Onsins et al.
HEREDITY (2014)
Analysing the relationship between lncRNA and protein-coding gene and the role of lncRNA as ceRNA in pulmonary fibrosis
Xiaodong Song et al.
JOURNAL OF CELLULAR AND MOLECULAR MEDICINE (2014)
The DNA methylation landscape of human early embryos
Hongshan Guo et al.
NATURE (2014)
The evolution of lncRNA repertoires and expression patterns in tetrapods
Anamaria Necsulea et al.
NATURE (2014)
DNA methylation and evolution of duplicate genes
Thomas E. Keller et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Conserved expression of lincRNA during human and macaque prefrontal cortex development and maturation
Zhisong He et al.
RNA (2014)
Transcriptional regulatory functions of nuclear long noncoding RNAs
Keith W. Vance et al.
TRENDS IN GENETICS (2014)
Genomic analyses identify distinct patterns of selection in domesticated pigs and Tibetan wild boars
Mingzhou Li et al.
NATURE GENETICS (2013)
Comprehensive Characterization of 10,571 Mouse Large Intergenic Noncoding RNAs from Whole Transcriptome Sequencing
Haitao Luo et al.
PLOS ONE (2013)
Signatures of Diversifying Selection in European Pig Breeds
Samantha Wilkinson et al.
PLOS GENETICS (2013)
Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression
Xin Li et al.
BMC GENOMICS (2012)
Analyses of pig genomes provide insight into porcine demography and evolution
Martien A. M. Groenen et al.
NATURE (2012)
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
Cole Trapnell et al.
NATURE PROTOCOLS (2012)
Genome-wide analysis reveals distinct patterns of epigenetic features in long non-coding RNA loci
Satish Sati et al.
NUCLEIC ACIDS RESEARCH (2012)
Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation
Davis J. McCarthy et al.
NUCLEIC ACIDS RESEARCH (2012)
Strong signatures of selection in the domestic pig genome
Carl-Johan Rubin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications
Felix Krueger et al.
BIOINFORMATICS (2011)
Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
Moran N. Cabili et al.
GENES & DEVELOPMENT (2011)
Association analysis of C6 genetic variations and aspirin hypersensitivity in Korean asthmatic patients
Charisse Flerida A. Pasaje et al.
HUMAN IMMUNOLOGY (2011)
A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression
Kevin C. Wang et al.
NATURE (2011)
lincRNAs act in the circuitry controlling pluripotency and differentiation
Mitchell Guttman et al.
NATURE (2011)
DEGseq: an R package for identifying differentially expressed genes from RNA-seq data
Likun Wang et al.
BIOINFORMATICS (2010)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Long Noncoding RNAs with Enhancer-like Function in Human Cells
Ulf Andersson Orom et al.
CELL (2010)
RELT induces cellular death in HEK 293 epithelial cells
John K. Cusick et al.
CELLULAR IMMUNOLOGY (2010)
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
Aaron McKenna et al.
GENOME RESEARCH (2010)
Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
Rajnish A. Gupta et al.
NATURE (2010)
Single base-resolution methylome of the silkworm reveals a sparse epigenomic map
Hui Xiang et al.
NATURE BIOTECHNOLOGY (2010)
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
Cole Trapnell et al.
NATURE BIOTECHNOLOGY (2010)
Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells
Sabine Loewer et al.
NATURE GENETICS (2010)
Evolution and public health
Gilbert S. Omenn
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Long Noncoding RNA as Modular Scaffold of Histone Modification Complexes
Miao-Chih Tsai et al.
SCIENCE (2010)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
Long noncoding RNAs: functional surprises from the RNA world
Jeremy E. Wilusz et al.
GENES & DEVELOPMENT (2009)
Contrasting Mode of Evolution at a Coat Color Locus in Wild and Domestic Pigs
Meiying Fang et al.
PLOS GENETICS (2009)
Studying Phenotypic Evolution in Domestic Animals: A Walk in the Footsteps of Charles Darwin
L. Andersson
EVOLUTION: THE MOLECULAR LANDSCAPE (2009)
The development of porcine models of obesity and the metabolic syndrome
Michael E. Spurlock et al.
JOURNAL OF NUTRITION (2008)
Opinion - Transposable elements and the evolution of regulatory networks
Cedric Feschotte
NATURE REVIEWS GENETICS (2008)
CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine
Lei Kong et al.
NUCLEIC ACIDS RESEARCH (2007)
Low rates of expression profile divergence in highly expressed genes and tissue-specific genes during mammalian evolution
Ben-Yang Liao et al.
MOLECULAR BIOLOGY AND EVOLUTION (2006)
Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification
I Yanai et al.
BIOINFORMATICS (2005)
Protective function of complement against alcohol-induced rat liver damage
IL Bykov et al.
INTERNATIONAL IMMUNOPHARMACOLOGY (2004)
The non-coding Air RNA is required for silencing autosomal imprinted genes
F Sleutels et al.
NATURE (2002)
Share Paper
