4.8 Article

A biobank of patient-derived pediatric brain tumor models

Related references

Note: Only part of the references are listed.
Article Clinical Neurology

Molecular heterogeneity and CXorf67 alterations in posterior fossa group A (PFA) ependymomas

Kristian W. Pajtler et al.

ACTA NEUROPATHOLOGICA (2018)

Article Biotechnology & Applied Microbiology

Computational approach to discriminate human and mouse sequences in patient-derived tumour xenografts

Maurizio Callari et al.

BMC GENOMICS (2018)

Article Multidisciplinary Sciences

DNA methylation-based classification of central nervous system tumours

David Capper et al.

NATURE (2018)

Article Multidisciplinary Sciences

The whole-genome landscape of medulloblastoma subtypes

Paul A. Northcott et al.

NATURE (2017)

Article Multidisciplinary Sciences

Orthotopic patient-derived xenografts of paediatric solid tumours

Elizabeth Stewart et al.

NATURE (2017)

Review Oncology

Tumor-Derived Cell Lines as Molecular Models of Cancer Pharmacogenomics

Andrew Goodspeed et al.

MOLECULAR CANCER RESEARCH (2016)

Article Biochemistry & Molecular Biology

New Brain Tumor Entities Emerge from Molecular Classification of CNS-PNETs

Dominik Sturm et al.

Correction Biochemistry & Molecular Biology

Functionally defined therapeutic targets in diffuse intrinsic pontine glioma (vol 21, pg 555, 2015)

Catherine S. Grasso et al.

NATURE MEDICINE (2015)

Article Oncology

Cytogenetic Prognostication Within Medulloblastoma Subgroups

David J. H. Shih et al.

JOURNAL OF CLINICAL ONCOLOGY (2014)

Article Multidisciplinary Sciences

Enhancer hijacking activates GFI1 family oncogenes in medulloblastoma

Paul A. Northcott et al.

NATURE (2014)

Article Multidisciplinary Sciences

Decoding the regulatory landscape of medulloblastoma using DNA methylation sequencing

Volker Hovestadt et al.

NATURE (2014)

Article Multidisciplinary Sciences

C11orf95-RELA fusions drive oncogenic NF-κB signalling in ependymoma

Matthew Parker et al.

NATURE (2014)

Article Multidisciplinary Sciences

Endogenous retrovirus induces leukemia in a xenograft mouse model for primary myelofibrosis

Ioanna Triviai et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Biochemical Research Methods

STAR: ultrafast universal RNA-seq aligner

Alexander Dobin et al.

BIOINFORMATICS (2013)

Article Biochemistry & Molecular Biology

Dynamic DNA methylation across diverse human cell lines and tissues

Katherine E. Varley et al.

GENOME RESEARCH (2013)

Article Biochemistry & Molecular Biology

TSGene: a web resource for tumor suppressor genes

Min Zhao et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Clinical Neurology

Molecular subgroups of medulloblastoma: the current consensus

Michael D. Taylor et al.

ACTA NEUROPATHOLOGICA (2012)

Article Biochemical Research Methods

deFuse: An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data

Andrew McPherson et al.

PLOS COMPUTATIONAL BIOLOGY (2011)

Article Multidisciplinary Sciences

Cross-species genomics matches driver mutations and cell compartments to model ependymoma

Robert A. Johnson et al.

NATURE (2010)

Article Biochemistry & Molecular Biology

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

Kai Wang et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemical Research Methods

Fast and accurate short read alignment with Burrows-Wheeler transform

Heng Li et al.

BIOINFORMATICS (2009)

Article Biochemical Research Methods

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Da Wei Huang et al.

NATURE PROTOCOLS (2009)

Editorial Material Biochemistry & Molecular Biology

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

Da Wei Huang et al.

NUCLEIC ACIDS RESEARCH (2009)

Letter Mathematical & Computational Biology

Comments on 'Chi-squared and Fisher-Irwin tests of two-by-two tables with small sample recommendations'

Antonio Martin Andres

STATISTICS IN MEDICINE (2008)

Article Oncology

The pediatric preclinical testing program: Description of models and early testing results

Peter J. Houghton et al.

PEDIATRIC BLOOD & CANCER (2007)

Article Mathematical & Computational Biology

Chi-squared and Fisher-Irwin tests of two-by-two tables with small sample recommendations

Ian Campbell

STATISTICS IN MEDICINE (2007)

Article Biochemical Research Methods

Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis

CL Wilson et al.

BIOINFORMATICS (2005)

Review Oncology

A census of human cancer genes

PA Futreal et al.

NATURE REVIEWS CANCER (2004)

Article Biochemical Research Methods

TM4: A free, open-source system for microarray data management and analysis

AI Saeed et al.

BIOTECHNIQUES (2003)