4.6 Article

Selection of Reference Genes for qRT-PCR Analysis in Lentinula edodes after Hot-Air Drying

Journal

MOLECULES
Volume 24, Issue 1, Pages -

Publisher

MDPI
DOI: 10.3390/molecules24010136

Keywords

Lentinula edodes; hot-air drying; volatile sulfur compounds; qRT-PCR; reference genes

Funding

  1. Natural Science Foundation of China [31601434]
  2. Major Projects of Technological Innovation of Hubei Province [2017ABA148]
  3. China Postdoctoral Science Foundation [2016T90701]

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Volatile sulfur compounds gradually develop in Lentinula edodes after hot-air drying, and many genes are involved in the generation of these sulfur compounds. The expression stability of reference genes may vary in a particular experimental treatment when analyzing their expressions by quantitative real-time polymerase chain reaction (qRT-PCR). In this study, the expression profile of 17 candidate genes was assessed in L. edodes under treatment at 50 degrees C for 0, 1, 2, and 3 h, and the expression stability of each reference gene was analyzed by three statistical algorithms, including geNorm, NormFinder, and BestKeeper. Results indicated that the two optimal reference genes for mycelium and fruiting body were CAC and DAHP as well as CAC and NUP, respectively. Additionally, CAC and DAHP were found to be the two most stable reference genes across the mycelium and fruiting body set. Our results will provide a genetic foundation for further research on the metabolism genes of sulfur compounds in L. edodes.

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