4.4 Article

Characterization of the hepatic transcriptome following phenobarbital induction in mice with AIP

Journal

MOLECULAR GENETICS AND METABOLISM
Volume 128, Issue 3, Pages 382-390

Publisher

ACADEMIC PRESS INC ELSEVIER SCIENCE
DOI: 10.1016/j.ymgme.2018.12.010

Keywords

Acute Intermittent Porphyria; Mouse model; Phenobarbital; RNA-seq; Transcriptome

Funding

  1. Department of Genetics and Genomic Sciences at the Icahn School of Medicine at Mount Sinai
  2. National Institutes of Health (NIH) [K01 DK087971, U54 DK083909]
  3. NCATS Rare Diseases Clinical Research Network (RDCRN) of the National Institutes of Health
  4. Office of Rare Diseases Research (ORDR)
  5. NCATS
  6. NIDDK

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Acute Intermittent Porphyria (MP), an autosomal dominant hepatic disorder, results from hydroxymethylbilane synthase (HMBS) mutations that decrease the encoded enzymatic activity, thereby predisposing patients to lifethreatening acute neurovisceral attacks. The 1% penetrance of AIP suggests that other genetic factors modulate the onset and severity of the acute attacks. Here, we characterized the hepatic transcriptomic response to phenobarbital (PB) administration in MP mice, which mimics the biochemical attacks of AIP. At baseline, the mRNA profiles of 14,138 hepatic genes prior to treatment were remarkably similar between AIP and the congenic wild-type (WT) mice. After PB treatment (-120 mg/kg x 3d), 1347 and 1120 genes in AIP mice and 422 and 404 genes in WT mice were uniquely up- and down-regulated, respectively, at a False Discovery Rate < 0.05. As expected, the ALAS1 expression increased 4.5-fold and 15.9-fold in the WT and AIP mice, respectively. ALA-dehydrogenase also was induced 1.7-fold in PB-induced AIP mice, but was unchanged in PBinduced WT mice. There was no statistically significant difference in the overall expression of 155 hepatic cytochrome P450 enzymes, although Cyp2c40, Cyp2c68, Cyp2c69, Mgst3 were upregulated only in PB-induced AIP mice ( > 1.9-fold) and Cyp2lal was upregulated only in PB-induced WT mice ( > 9-fold). Notably, the genes differentially expressed in induced AIP mice were enriched in circadian rhythm, mitochondria biogenesis and electron transport, suggesting these pathways were involved in AIP mice responding to PB treatment. These results advance our understanding of the hepatic metabolic changes in PB-induced AIP mice and have implications in the pathogenesis of AIP acute attacks.

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