Related references
Note: Only part of the references are listed.Host Genotype and Nitrogen Form Shape the Root Microbiome of Pinus radiata
Marta Gallart et al.
MICROBIAL ECOLOGY (2018)
Fungal Communities and Functional Guilds Shift Along an Elevational Gradient in the Southern Appalachian Mountains
Allison M. Veach et al.
MICROBIAL ECOLOGY (2018)
Host preference and network properties in biotrophic plant-fungal associations
Sergei Polme et al.
NEW PHYTOLOGIST (2018)
Forest conversion induces seasonal variation in microbial beta-diversity
Shengen Liu et al.
ENVIRONMENTAL MICROBIOLOGY (2018)
Scaling up: A guide to high-throughput genomic approaches for biodiversity analysis
Teresita M. Porter et al.
MOLECULAR ECOLOGY (2018)
Effects of oak, beech and spruce on the distribution and community structure of fungi in litter and soils across a temperate forest
Barbara Bahnmann et al.
SOIL BIOLOGY & BIOCHEMISTRY (2018)
A guide to phylogenetic metrics for conservation, community ecology and macroecology
Caroline M. Tucker et al.
BIOLOGICAL REVIEWS (2017)
Phylogenetic and functional traits of ectomycorrhizal assemblages in top soil from different biogeographic regions and forest types
Rodica Pena et al.
MYCORRHIZA (2017)
Environment and geographic distance differ in relative importance for determining fungal community of rhizosphere and bulk soil
Kaoping Zhang et al.
ENVIRONMENTAL MICROBIOLOGY (2017)
Communities of Putative Ericoid Mycorrhizal Fungi Isolated from Alpine Dwarf Shrubs in Japan: Effects of Host Identity and Microhabitat
Takahiko Koizumi et al.
MICROBES AND ENVIRONMENTS (2017)
Environmental filtering by pH and soil nutrients drives community assembly in fungi at fine spatial scales
Sydney I. Glassman et al.
MOLECULAR ECOLOGY (2017)
Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
Kristy Deiner et al.
MOLECULAR ECOLOGY (2017)
Growing evidence for facultative biotrophy in saprotrophic fungi: data from microcosm tests with 201 species of wood-decay basidiomycetes
Gabriel R. Smith et al.
NEW PHYTOLOGIST (2017)
Habitat- and soil-related drivers of the root-associated fungal community of Quercus suber in the Northern Moroccan forest
Fatima Zahra Maghnia et al.
PLOS ONE (2017)
Root-associated fungal communities along a primary succession on a mine spoil: Distinct ecological guilds assemble differently
Zuzana Kolarikova et al.
SOIL BIOLOGY & BIOCHEMISTRY (2017)
Normalization and microbial differential abundance strategies depend upon data characteristics
Sophie Weiss et al.
MICROBIOME (2017)
Quantifying stand structural complexity and its relationship with forest management, tree species diversity and microclimate
Martin Ehbrecht et al.
AGRICULTURAL AND FOREST METEOROLOGY (2017)
Understanding the holobiont: the interdependence of plants and their microbiome
Carmen Sanchez-Canizares et al.
CURRENT OPINION IN MICROBIOLOGY (2017)
Ericoid fungal diversity: Challenges and opportunities for mycorrhizal research
Devin R. Leopold
FUNGAL ECOLOGY (2016)
Fungi associated with dieback of Abies alba seedlings in naturally regenerating forest ecosystems
Robert Jankowiak et al.
FUNGAL ECOLOGY (2016)
FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
Nhu H. Nguyen et al.
FUNGAL ECOLOGY (2016)
Community assembly and coexistence in communities of arbuscular mycorrhizal fungi
Kriszta Valyi et al.
ISME JOURNAL (2016)
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
Sudhir Kumar et al.
MOLECULAR BIOLOGY AND EVOLUTION (2016)
Unearthing the roots of ectomycorrhizal symbioses
Francis Martin et al.
NATURE REVIEWS MICROBIOLOGY (2016)
Dimensions of biodiversity in the Earth mycobiome
Kabir G. Peay et al.
NATURE REVIEWS MICROBIOLOGY (2016)
Dead fungal mycelium in forest soil represents a decomposition hotspot and a habitat for a specific microbial community
Vendula Brabcova et al.
NEW PHYTOLOGIST (2016)
Acid and calcareous soils affect nitrogen nutrition and organic nitrogen uptake by beech seedlings (Fagus sylvatica L.) under drought, and their ectomycorrhizal community structure
Martin Leberecht et al.
PLANT AND SOIL (2016)
Analysis of the Phialocephala subalpina Transcriptome during Colonization of Its Host Plant Picea abies
Vanessa Reininger et al.
PLOS ONE (2016)
Root Fungal Endophytes Enhance Heavy-Metal Stress Tolerance of Clethra barbinervis Growing Naturally at Mining Sites via Growth Enhancement, Promotion of Nutrient Uptake and Decrease of Heavy-Metal Concentration
Keiko Yamaji et al.
PLOS ONE (2016)
Ecology of the forest microbiome: Highlights of temperate and boreal ecosystems
S. Uroz et al.
SOIL BIOLOGY & BIOCHEMISTRY (2016)
Tree species select diverse soil fungal communities expressing different sets of lignocellulolytic enzyme-encoding genes
Florian Barbi et al.
SOIL BIOLOGY & BIOCHEMISTRY (2016)
Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation
Matthew T. Agler et al.
PLOS BIOLOGY (2016)
Phylogenetic clustering of fungal communities in human-disturbed streams
H. Mykra et al.
ECOSPHERE (2016)
A New Oidiodendron maius Strain Isolated from Rhododendron fortunei and its Effects on Nitrogen Uptake and Plant Growth
Xiangying Wei et al.
FRONTIERS IN MICROBIOLOGY (2016)
Divergent habitat filtering of root and soil fungal communities in temperate beech forests
Kezia Goldmann et al.
SCIENTIFIC REPORTS (2016)
Fungal Community Shifts in Structure and Function across a Boreal Forest Fire Chronosequence
Hui Sun et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)
A new dynamic null model for phylogenetic community structure
Alex L. Pigot et al.
ECOLOGY LETTERS (2015)
Species turnover (β-diversity) in ectomycorrhizal fungi linked to NH4+ uptake capacity
J. M. Kranabetter et al.
MOLECULAR ECOLOGY (2015)
The importance of the microbiome of the plant holobiont
Philippe Vandenkoornhuyse et al.
NEW PHYTOLOGIST (2015)
Functional guild classification predicts the enzymatic role of fungi in litter and soil biogeochemistry
Jennifer M. Talbot et al.
SOIL BIOLOGY & BIOCHEMISTRY (2015)
The role of stochasticity differs in the assembly of soil- and root-associated fungal communities
Sarah Beck et al.
SOIL BIOLOGY & BIOCHEMISTRY (2015)
Composition of fungal and bacterial communities in forest litter and soil is largely determined by dominant trees
Michaela Urbanova et al.
SOIL BIOLOGY & BIOCHEMISTRY (2015)
Deterministic processes vary during community assembly for ecologically dissimilar taxa
Jeff R. Powell et al.
NATURE COMMUNICATIONS (2015)
Forest Management Type Influences Diversity and Community Composition of Soil Fungi across Temperate Forest Ecosystems
Kezia Goldmann et al.
FRONTIERS IN MICROBIOLOGY (2015)
Do ectomycorrhizal and arbuscular mycorrhizal temperate tree species systematically differ in root order-related fine root morphology and biomass?
Petra Kubisch et al.
FRONTIERS IN PLANT SCIENCE (2015)
Community assembly of ectomycorrhizal fungi along a subtropical secondary forest succession
Cheng Gao et al.
NEW PHYTOLOGIST (2015)
Dispersal limitation structures fungal community assembly in a long-term glacial chronosequence
Lauren C. Cline et al.
ENVIRONMENTAL MICROBIOLOGY (2014)
Environmental filtering affects soil fungal community composition more than dispersal limitation at regional scales
Stephanie N. Kivlin et al.
FUNGAL ECOLOGY (2014)
Attributing functions to ectomycorrhizal fungal identities in assemblages for nitrogen acquisition under stress
Rodica Pena et al.
ISME JOURNAL (2014)
When the forest dies: the response of forest soil fungi to a bark beetle-induced tree dieback
Martina Stursova et al.
ISME JOURNAL (2014)
Near-to-nature logging influences fungal community assembly processes in a temperate forest
Claus Baessler et al.
JOURNAL OF APPLIED ECOLOGY (2014)
Factors controlling decomposition rates of fine root litter in temperate forests and grasslands
Emily F. Solly et al.
PLANT AND SOIL (2014)
Comparison and Validation of Some ITS Primer Pairs Useful for Fungal Metabarcoding Studies
Michiel Op De Beeck et al.
PLOS ONE (2014)
Global diversity and geography of soil fungi
Leho Tedersoo et al.
SCIENCE (2014)
An index of forest management intensity based on assessment of harvested tree volume, tree species composition and dead wood origin
Tiemo Kahl et al.
Nature Conservation-Bulgaria (2014)
Can land use intensity be reliably quantified by using a single self-thinning relationship?
Peter Schall et al.
ECOLOGICAL APPLICATIONS (2013)
Ectomycorrhiza affect architecture and nitrogen partitioning of beech (Fagus sylvatica L.) seedlings under shade and drought
Rodica Pena et al.
ENVIRONMENTAL AND EXPERIMENTAL BOTANY (2013)
How to quantify forest management intensity in Central European forests
Peter Schall et al.
EUROPEAN JOURNAL OF FOREST RESEARCH (2013)
What determines Alnus-associated ectomycorrhizal community diversity and specificity? A comparison of host and habitat effects at a regional scale
Melanie Roy et al.
NEW PHYTOLOGIST (2013)
Towards a unified paradigm for sequence-based identification of fungi
Urmas Koljalg et al.
MOLECULAR ECOLOGY (2013)
Going back to the roots: the microbial ecology of the rhizosphere
Laurent Philippot et al.
NATURE REVIEWS MICROBIOLOGY (2013)
The root microbiota-a fingerprint in the soil?
Aleklett Kristin et al.
PLANT AND SOIL (2013)
Ectomycorrhizal Colonization and Diversity in Relation to Tree Biomass and Nutrition in a Plantation of Transgenic Poplars with Modified Lignin Biosynthesis
Lara Danielsen et al.
PLOS ONE (2013)
Roots and Associated Fungi Drive Long-Term Carbon Sequestration in Boreal Forest
K. E. Clemmensen et al.
SCIENCE (2013)
Functional diversity and resource partitioning in fungi associated with the fine feeder roots of forest trees
Gavin Kernaghan
SYMBIOSIS (2013)
How are plant and fungal communities linked to each other in belowground ecosystems? A massively parallel pyrosequencing analysis of the association specificity of root-associated fungi and their host plants
Hirokazu Toju et al.
ECOLOGY AND EVOLUTION (2013)
Community composition of root-associated fungi in a Quercus-dominated temperate forest: codominance of mycorrhizal and root-endophytic fungi
Hirokazu Toju et al.
ECOLOGY AND EVOLUTION (2013)
Lineages of ectomycorrhizal fungi revisited: Foraging strategies and novel lineages revealed by sequences from belowground
Leho Tedersoo et al.
FUNGAL BIOLOGY REVIEWS (2013)
Host plant and environment influence community assembly of High Arctic root-associated fungal communities
Kei E. Fujimura et al.
FUNGAL ECOLOGY (2012)
Measuring ectomycorrhizal fungal dispersal: macroecological patterns driven by microscopic propagules
Kabir G. Peay et al.
MOLECULAR ECOLOGY (2012)
Fast, accurate error-correction of amplicon pyrosequences using Acacia
Lauren Bragg et al.
NATURE METHODS (2012)
The Dark Side Is Not Fastidious - Dark Septate Endophytic Fungi of Native and Invasive Plants of Semiarid Sandy Areas
Daniel G. Knapp et al.
PLOS ONE (2012)
Differences in Soil Fungal Communities between European Beech (Fagus sylvatica L.) Dominated Forests Are Related to Soil and Understory Vegetation
Tesfaye Wubet et al.
PLOS ONE (2012)
The rhizosphere microbiome and plant health
Roeland L. Berendsen et al.
TRENDS IN PLANT SCIENCE (2012)
Ericoid mycorrhizal root fungi and their multicopper oxidases from a temperate forest shrub
Nina Wurzburger et al.
ECOLOGY AND EVOLUTION (2012)
Fungal soil communities in a young transgenic poplar plantation form a rich reservoir for fungal root communities
L. Danielsen et al.
ECOLOGY AND EVOLUTION (2012)
UCHIME improves sensitivity and speed of chimera detection
Robert C. Edgar et al.
BIOINFORMATICS (2011)
Quantifying land use and disturbance intensity in forestry, based on the self-thinning relationship
S. Luyssaert et al.
ECOLOGICAL APPLICATIONS (2011)
Conceptual approaches to integrate nature conservation into forest management: a Central European perspective
A. Boncina
INTERNATIONAL FORESTRY REVIEW (2011)
Host preferences and differential contributions of deciduous tree species shape mycorrhizal species richness in a mixed Central European forest
Christa Lang et al.
MYCORRHIZA (2011)
Diverse Helotiales associated with the roots of three species of Arctic Ericaceae provide no evidence for host specificity
John F. Walker et al.
NEW PHYTOLOGIST (2011)
Disentangling the importance of ecological niches from stochastic processes across scales
Jonathan M. Chase et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2011)
Girdling Affects Ectomycorrhizal Fungal (EMF) Diversity and Reveals Functional Differences in EMF Community Composition in a Beech Forest
Rodica Pena et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Implementing large-scale and long-term functional biodiversity research: The Biodiversity Exploratories
Markus Fischer et al.
BASIC AND APPLIED ECOLOGY (2010)
Picante: R tools for integrating phylogenies and ecology
Steven W. Kembel et al.
BIOINFORMATICS (2010)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
The Jungle of Methods for Evaluating Phenotypic and Phylogenetic Structure of Communities
Juli G. Pausas et al.
BIOSCIENCE (2010)
Evidence of dispersal limitation in soil microorganisms: Isolation reduces species richness on mycorrhizal tree islands
Kabir G. Peay et al.
ECOLOGY (2010)
Ectomycorrhizal lifestyle in fungi: global diversity, distribution, and evolution of phylogenetic lineages
Leho Tedersoo et al.
MYCORRHIZA (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
BLAST plus : architecture and applications
Christiam Camacho et al.
BMC BIOINFORMATICS (2009)
The merging of community ecology and phylogenetic biology
Jeannine Cavender-Bares et al.
ECOLOGY LETTERS (2009)
Emerging patterns in the comparative analysis of phylogenetic community structure
S. M. Vamosi et al.
MOLECULAR ECOLOGY (2009)
Diversity and species distribution of ectomycorrhizal fungi along productivity gradients of a southern boreal forest
J. M. Kranabetter et al.
MYCORRHIZA (2009)
454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity
M. Buee et al.
NEW PHYTOLOGIST (2009)
Using Phylogenetic, Functional and Trait Diversity to Understand Patterns of Plant Community Productivity
Marc W. Cadotte et al.
PLOS ONE (2009)
Mycorrhizal communities in relation to biomass production and nutrient use efficiency in two varieties of Douglas fir (Pseudotsuga menziesii var. menziesii and var. glauca) in different forest soils
Tanja Ducic et al.
SOIL BIOLOGY & BIOCHEMISTRY (2009)
Temporal changes in the ectomycorrhizal community in two soil horizons of a temperate oak forest
Pierre-Emmanuel Courty et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Phylocom: software for the analysis of phylogenetic community structure and trait evolution
Campbell O. Webb et al.
BIOINFORMATICS (2008)
BioVenn - a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams
Tim Hulsen et al.
BMC GENOMICS (2008)
The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems
Marcel G. A. van der Heijden et al.
ECOLOGY LETTERS (2008)
Ericoid mycorrhizal fungi are common root inhabitants of non-Ericaceae plants in a south-eastern Australian sclerophyll forest
Susan M. Chambers et al.
FEMS MICROBIOLOGY ECOLOGY (2008)
A common tendency for phylogenetic overdispersion in mammalian assemblages
Natalie Cooper et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2008)
Phylogenetic analysis of community assembly and structure over space and time
Brent C. Emerson et al.
TRENDS IN ECOLOGY & EVOLUTION (2008)
Decomposition and fungi of needle litter from slow- and fast-growing norway spruce (Picea abies) clones
Tiina Korkama-Rajala et al.
MICROBIAL ECOLOGY (2008)
Drought mediates the importance of stochastic community assembly
Jonathan M. Chase
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Microbial biogeography:: putting microorganisms on the map
JBH Martiny et al.
NATURE REVIEWS MICROBIOLOGY (2006)
Prospects for inferring very large phylogenies by using the neighbor-joining method
K Tamura et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Interaction between an isolate from the Hymenoscyphus ericae aggregate and roots of Pinus and Vaccinium
L Villarreal-Ruiz et al.
NEW PHYTOLOGIST (2004)
Multiple sequence alignment with the Clustal series of programs
R Chenna et al.
NUCLEIC ACIDS RESEARCH (2003)
Share Paper
