4.6 Article

A database-driven approach identifies additional diterpene synthase activities in the mint family (Lamiaceae)

Journal

JOURNAL OF BIOLOGICAL CHEMISTRY
Volume 294, Issue 4, Pages 1349-1362

Publisher

AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC
DOI: 10.1074/jbc.RA118.006025

Keywords

secondary metabolism; terpenoid; plant biochemistry; transcriptomics; biosynthesis; chemotaxonomy; diterpene synthase; enzymes; Lamiaceae; phytochemistry

Funding

  1. Michigan State University Strategic Partnership Grant program
  2. Science and Engineering Research Board (SERB), Department of Science and Technology, Government of India
  3. Indo-US Science and Technology Forum (IUSSTF) Indo-US postdoctoral fellowship
  4. United States Department of Energy-Great Lakes Bioenergy Research Center [DE-FC02-07ER64494, DE-SC0018409]
  5. Michigan State University Strategic Partnership Grant program Plant-inspired Chemical Diversity
  6. Department of Molecular Biology and Biochemistry, Michigan State University
  7. Michigan State University AgBioResearch Grant [MICL02454]
  8. National Science Foundation [1737898]
  9. U.S. Department of Energy (DOE) [DE-SC0018409] Funding Source: U.S. Department of Energy (DOE)
  10. Direct For Biological Sciences
  11. Division Of Environmental Biology [1737898] Funding Source: National Science Foundation

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Members of the mint family (Lamiaceae) accumulate a wide variety of industrially and medicinally relevant diterpenes. We recently sequenced leaf transcriptomes from 48 phylogenetically diverse Lamiaceae species. Here, we summarize the available chemotaxonomic and enzyme activity data for diterpene synthases (diTPSs) in the Lamiaceae and leverage the new transcriptomes to explore the diTPS sequence and functional space. Candidate genes were selected with an intent to evenly sample the sequence homology space and to focus on species in which diTPS transcripts were found, yet from which no diterpene structures have been previously reported. We functionally characterized nine class II diTPSs and 10 class I diTPSs from 11 distinct plant species and found five class II activities, including two novel activities, as well as a spectrum of class I activities. Among the class II diTPSs, we identified a neo-cleroda-4(18),13E-dienyl diphosphate synthase from Ajuga reptans, catalyzing the likely first step in the biosynthesis of a variety of insect-antifeedant compounds. Among the class I diTPSs was a palustradiene synthase from Origanum majorana, leading to the discovery of specialized diterpenes in that species. Our results provide insights into the diversification of diterpene biosynthesis in the mint family and establish a comprehensive foundation for continued investigation of diterpene biosynthesis in the Lamiaceae.

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