4.7 Review

Cheesomics: the future pathway to understanding cheese flavour and quality

Related references

Note: Only part of the references are listed.
Review Agriculture, Dairy & Animal Science

Invited review: Bioactive compounds produced during cheese ripening and health effects associated with aged cheese consumption

Lourdes Santiago-Lopez et al.

JOURNAL OF DAIRY SCIENCE (2018)

Article Nutrition & Dietetics

Cheese consumption and risk of cardiovascular disease: a meta-analysis of prospective studies

Guo-Chong Chen et al.

EUROPEAN JOURNAL OF NUTRITION (2017)

Review Biotechnology & Applied Microbiology

Metagenomics insights into food fermentations

Francesca De Filippis et al.

MICROBIAL BIOTECHNOLOGY (2017)

Article Food Science & Technology

Functional genomics provides insights into the role of Propionibacterium freudenreichii ssp shermanii JS in cheese ripening

Teija Ojala et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2017)

Review Biotechnology & Applied Microbiology

Shotgun metagenomics, from sampling to analysis

Christopher Quince et al.

NATURE BIOTECHNOLOGY (2017)

Article Biotechnology & Applied Microbiology

1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

Supratim Mukherjee et al.

NATURE BIOTECHNOLOGY (2017)

Review Chemistry, Analytical

Novel mass spectrometry approaches in food proteomics

Robin Korte et al.

TRAC-TRENDS IN ANALYTICAL CHEMISTRY (2017)

Review Food Science & Technology

Translating Omics to Food Microbiology

Aaron M. Walsh et al.

ANNUAL REVIEW OF FOOD SCIENCE AND TECHNOLOGY, VOL 8 (2017)

Article Multidisciplinary Sciences

Large-scale differences in microbial biodiversity discovery between 16S amplicon and shotgun sequencing

Michael Tessler et al.

SCIENTIFIC REPORTS (2017)

Article Microbiology

The Evolution of gene regulation research in Lactococcus lactis

Jan Kok et al.

FEMS MICROBIOLOGY REVIEWS (2017)

Review Biochemical Research Methods

Health benefits of fermented foods: microbiota and beyond

Maria L. Marco et al.

CURRENT OPINION IN BIOTECHNOLOGY (2017)

Article Biotechnology & Applied Microbiology

Lactobacillus and Leuconostoc volatilomes in cheese conditions

Tomislav Pogacic et al.

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2016)

Article Biotechnology & Applied Microbiology

Metagenomic analysis of a Mexican ripened cheese reveals a unique complex microbiota

Alejandra Escobar-Zepeda et al.

FOOD MICROBIOLOGY (2016)

Article Food Science & Technology

Characterisation of microbial diversity and chemical properties of Cheddar cheese prepared from heat-treated milk

Ji Young Lee et al.

INTERNATIONAL DAIRY JOURNAL (2016)

Article Food Science & Technology

Highlighting the microbial diversity of 12 French cheese varieties

Eric Dugat-Bony et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2016)

Article Food Science & Technology

Can the development and autolysis of lactic acid bacteria influence the cheese volatile fraction? The case of Grana Padano

Camilla Lazzi et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2016)

Article Biochemical Research Methods

Proteome analysis of Lactobacillus plantarum strain under cheese-like conditions

Zhen Wu et al.

JOURNAL OF PROTEOMICS (2016)

Article Agriculture, Multidisciplinary

Proteomic and peptidomic profiling of Brazilian artisanal 'Coalho' cheese

Roberto A. Silva et al.

JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE (2016)

Review Biochemical Research Methods

Functional proteomics within the genus Lactobacillus

Maria De Angelis et al.

PROTEOMICS (2016)

Review Food Science & Technology

Metabolomic Technologies for Improving the Quality of Food: Practice and Promise

Suzanne D. Johanningsmeier et al.

ANNUAL REVIEW OF FOOD SCIENCE AND TECHNOLOGY, VOL 7 (2016)

Article Microbiology

Characterization of the Gut Microbiome Using 16S or Shotgun Metagenomics

Juan Jovel et al.

FRONTIERS IN MICROBIOLOGY (2016)

Article Multidisciplinary Sciences

Metatranscriptomics reveals temperature-driven functional changes in microbiome impacting cheese maturation rate

Francesca De Filippis et al.

SCIENTIFIC REPORTS (2016)

Article Food Science & Technology

Comprehensive and quantitative profiling of lipid species in human milk, cow milk and a phospholipid-enriched milk formula by GC and MS/MSALL

Elena Sokol et al.

EUROPEAN JOURNAL OF LIPID SCIENCE AND TECHNOLOGY (2015)

Article Biotechnology & Applied Microbiology

A methodological approach to screen diverse cheese-related bacteria for their ability to produce aroma compounds

Tomislav Pogacic et al.

FOOD MICROBIOLOGY (2015)

Review Genetics & Heredity

Insights from 20 years of bacterial genome sequencing

Miriam Land et al.

FUNCTIONAL & INTEGRATIVE GENOMICS (2015)

Article Food Science & Technology

Characterization of the bacterial biodiversity in Pico cheese (an artisanal Azorean food)

Cristina Riquelme et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2015)

Article Agriculture, Multidisciplinary

Olfactometry Profiles and Quantitation of Volatile Sulfur Compounds of Swiss Tilsit Cheeses

Pascal Fuchsmann et al.

JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2015)

Review Microbiology

Twenty years of bacterial genome sequencing

Nicholas J. Loman et al.

NATURE REVIEWS MICROBIOLOGY (2015)

Review Microbiology

Sequencing and beyond: integrating molecular 'omics' for microbial community profiling

Eric A. Franzosa et al.

NATURE REVIEWS MICROBIOLOGY (2015)

Article Multidisciplinary Sciences

Overview of a Surface-Ripened Cheese Community Functioning by Meta-Omics Analyses

Eric Dugat-Bony et al.

PLOS ONE (2015)

Article Biotechnology & Applied Microbiology

High-throughput sequencing of microbial communities in Poro cheese, an artisanal Mexican cheese

Alejandro Aldrete-Tapia et al.

FOOD MICROBIOLOGY (2014)

Article Food Science & Technology

Cultivation-independent analysis of microbial communities on Austrian raw milk hard cheese rinds

Elisa Schornsteiner et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2014)

Article Food Science & Technology

Great interspecies and intraspecies diversity of dairy propionibacteria in the production of cheese aroma compounds

Alyson L. Yee et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2014)

Article Agriculture, Multidisciplinary

A Control Method To Inspect the Compositional Authenticity of Minas Frescal Cheese by Gel Electrophoresis

Renata B. Magenis et al.

JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2014)

Article Agriculture, Dairy & Animal Science

Transcriptomic analysis of Lactococcus chungangensis sp. nov. and its potential in cheese making

Maytiya Konkit et al.

JOURNAL OF DAIRY SCIENCE (2014)

Article Agriculture, Dairy & Animal Science

Microbiota characterization of a Belgian protected designation of origin cheese, Herve cheese, using metagenomic analysis

V. Delcenserie et al.

JOURNAL OF DAIRY SCIENCE (2014)

Article Biotechnology & Applied Microbiology

Functional genomics of lactic acid bacteria: from food to health

Franois P. Douillard et al.

MICROBIAL CELL FACTORIES (2014)

Article Multidisciplinary Sciences

Comparison and Validation of Some ITS Primer Pairs Useful for Fungal Metabarcoding Studies

Michiel Op De Beeck et al.

PLOS ONE (2014)

Review Genetics & Heredity

Ten years of next-generation sequencing technology

Erwin L. van Dijk et al.

TRENDS IN GENETICS (2014)

Review Nutrition & Dietetics

Dairy products and the risk of type 2 diabetes: a systematic review and dose-response meta-analysis of cohort studies

Dagfinn Aune et al.

AMERICAN JOURNAL OF CLINICAL NUTRITION (2013)

Review Biotechnology & Applied Microbiology

Next-generation sequencing and its potential impact on food microbial genomics

Lisa Solieri et al.

ANNALS OF MICROBIOLOGY (2013)

Review Biotechnology & Applied Microbiology

High-Throughput Sequencing and Metagenomics: Moving Forward in the Culture-Independent Analysis of Food Microbial Ecology

Danilo Ercolini

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)

Article Biotechnology & Applied Microbiology

Facility-Specific House Microbiome Drives Microbial Landscapes of Artisan Cheesemaking Plants

Nicholas A. Bokulich et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)

Review Chemistry, Multidisciplinary

Protein Analysis by Shotgun/Bottom-up Proteomics

Yaoyang Zhang et al.

CHEMICAL REVIEWS (2013)

Review Biotechnology & Applied Microbiology

Current metabolomics: Practical applications

Sastia P. Putri et al.

JOURNAL OF BIOSCIENCE AND BIOENGINEERING (2013)

Article Agriculture, Dairy & Animal Science

Nonstarter lactic acid bacteria volatilomes produced using cheese components

E. Sgarbi et al.

JOURNAL OF DAIRY SCIENCE (2013)

Article Biotechnology & Applied Microbiology

Remake by High-Throughput Sequencing of the Microbiota Involved in the Production of Water Buffalo Mozzarella Cheese

Danilo Ercolini et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)

Article Biotechnology & Applied Microbiology

High-Throughput Sequencing for Detection of Subpopulations of Bacteria Not Previously Associated with Artisanal Cheeses

Lisa Quigley et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)

Article Food Science & Technology

Quantitative proteomic analysis of bacterial enzymes released in cheese during ripening

Julien Jardin et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2012)

Review Food Science & Technology

Food fermentations: Microorganisms with technological beneficial use

Francois Bourdichon et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2012)

Article Agriculture, Dairy & Animal Science

Proteomic study of proteolysis during ripening of Cheddar cheese made from milk over a lactation cycle

Katharina Hinz et al.

JOURNAL OF DAIRY RESEARCH (2012)

Review Biochemical Research Methods

Farm animal milk proteomics

Paola Roncada et al.

JOURNAL OF PROTEOMICS (2012)

Article Biotechnology & Applied Microbiology

Global Regulation of the Response to Sulfur Availability in the Cheese-Related Bacterium Brevibacterium aurantiacum

Marie-Pierre Forquin et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)

Article Food Science & Technology

Comparative transcriptome analysis of Lactococcus lactis subsp cremoris strains under conditions simulating Cheddar cheese manufacture

Amel Taibi et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2011)

Review Food Science & Technology

Molecular approaches to analysing the microbial composition of raw milk and raw milk cheese

Lisa Quigley et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2011)

Article Agriculture, Dairy & Animal Science

Growth of Lactobacillus paracasei ATCC 334 in a cheese model system: A biochemical approach

M. F. Budinich et al.

JOURNAL OF DAIRY SCIENCE (2011)

Article Multidisciplinary Sciences

A decade's perspective on DNA sequencing technology

Elaine R. Mardis

NATURE (2011)

Review Biotechnology & Applied Microbiology

Non-starter lactic acid bacteria used to improve cheese quality and provide health benefits

Luca Settanni et al.

FOOD MICROBIOLOGY (2010)

Article Food Science & Technology

Specific metabolic activity of ripening bacteria quantified by real-time reverse transcription PCR throughout Emmental cheese manufacture

Helene Falentin et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2010)

Review Genetics & Heredity

APPLICATIONS OF NEXT-GENERATION SEQUENCING Sequencing technologies - the next generation

Michael L. Metzker

NATURE REVIEWS GENETICS (2010)

Review Oncology

Clinical Applications of Metabolomics in Oncology: A Review

Jennifer L. Spratlin et al.

CLINICAL CANCER RESEARCH (2009)

Review Biochemistry & Molecular Biology

Microbial community profiling for human microbiome projects: Tools, techniques, and challenges

Micah Hamady et al.

GENOME RESEARCH (2009)

Article Food Science & Technology

Assessment of the microbial diversity at the surface of Livarot cheese using culture-dependent and independent approaches

J. Mounier et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2009)

Editorial Material Biochemical Research Methods

Lipidomics: Developments and applications Preface

Xianlin Han

JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES (2009)

Review Agriculture, Dairy & Animal Science

Invited review: Proteomics of milk and bacteria used in fermented dairy products: From qualitative to quantitative advances

V. Gagnaire et al.

JOURNAL OF DAIRY SCIENCE (2009)

Review Biochemical Research Methods

OMICS-rooted studies of milk proteins, oligosaccharides and lipids

Begona Casado et al.

JOURNAL OF PROTEOMICS (2009)

Review Food Science & Technology

Probiotic cheese: health benefits, technological and stability aspects

Adriano Gomes da Cruz et al.

TRENDS IN FOOD SCIENCE & TECHNOLOGY (2009)

Article Biotechnology & Applied Microbiology

Extraction of RNA from cheese without prior separation of microbial cells

Christophe Monnet et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)

Article Biotechnology & Applied Microbiology

Growth rate regulated genes and their wide involvement in the Lactococcus lactis stress responses

Clementine Dressaire et al.

BMC GENOMICS (2008)

Article Food Science & Technology

Cheese in nutrition and health

Barbara Walther et al.

DAIRY SCIENCE & TECHNOLOGY (2008)

Review Microbiology

Pre-genomic, genomic and postgenomic study of microbial communities involved in bioenergy

Bruce E. Rittmann et al.

NATURE REVIEWS MICROBIOLOGY (2008)

Review Ecology

Genotypic microbial community profiling: A critical technical review

Andreas Nocker et al.

MICROBIAL ECOLOGY (2007)

Article Microbiology

Time-resolved determination of the CcpA regulon of Lactococcus lactis subsp cremoris MG1363

Aldert L. Zomer et al.

JOURNAL OF BACTERIOLOGY (2007)

Article Multidisciplinary Sciences

Comparative genomics of the lactic acid bacteria

K. Makarova et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Biochemistry & Molecular Biology

The Lactococcus lactis CodY regulon -: Identification of a conserved cis-regulatory element

CD den Hengst et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2005)

Article Agriculture, Dairy & Animal Science

Antibacterial activities of peptides from the water-soluble extracts of Italian cheese varieties

CG Rizzello et al.

JOURNAL OF DAIRY SCIENCE (2005)

Article Food Science & Technology

Application of proteomics to the characterisation of milk and dairy products

MA Manso et al.

INTERNATIONAL DAIRY JOURNAL (2005)

Review Biotechnology & Applied Microbiology

Metabolomics by numbers: acquiring and understanding global metabolite data

R Goodacre et al.

TRENDS IN BIOTECHNOLOGY (2004)

Review Food Science & Technology

Milk proteomics

R O'Donnell et al.

INTERNATIONAL DAIRY JOURNAL (2004)

Review Microbiology

Metagenomics: Application of genomics to uncultured microorganisms

J Handelsman

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2004)

Review Cell Biology

Gene regulation by riboswitches

M Mandal et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2004)

Review Biochemistry & Molecular Biology

Plant metabolomics: large-scale phytochemistry in the functional genomics era

LW Sumner et al.

PHYTOCHEMISTRY (2003)

Article Multidisciplinary Sciences

Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays

JA Bernstein et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)

Article Biochemistry & Molecular Biology

The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp lactis IL1403

A Bolotin et al.

GENOME RESEARCH (2001)

Article Biotechnology & Applied Microbiology

Metabolite profiling for plant functional genomics

O Fiehn et al.

NATURE BIOTECHNOLOGY (2000)

Review Nutrition & Dietetics

Consumption of fermented and nonfermented dairy products: effects on cholesterol concentrations and metabolism

MP St-Onge et al.

AMERICAN JOURNAL OF CLINICAL NUTRITION (2000)