Related references
Note: Only part of the references are listed.Imputation from SNP chip to sequence: a case study in a Chinese indigenous chicken population
Shaopan Ye et al.
JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY (2018)
Improved imputation accuracy of rare and low-frequency variants using population-specific high-coverage WGS-based imputation reference panel
Mario Mitt et al.
EUROPEAN JOURNAL OF HUMAN GENETICS (2017)
The impact of rare and low-frequency genetic variants in common disease
Lorenzo Bomba et al.
GENOME BIOLOGY (2017)
Genotype Imputation with Millions of Reference Samples
Brian L. Browning et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2016)
Genetic features of red and green junglefowls and relationship with Indonesian native chickens Sumatera and Kedu Hitam
Maria Ulfah et al.
BMC GENOMICS (2016)
Meta-analysis of 49 549 individuals imputed with the 1000 Genomes Project reveals an exonic damaging variant in ANGPTL4 determining fasting TG levels
Elisabeth M. van Leeuwen et al.
JOURNAL OF MEDICAL GENETICS (2016)
Genotype imputation in the domestic dog
S. G. Friedenberg et al.
MAMMALIAN GENOME (2016)
A combined reference panel from the 1000 Genomes and UK10K projects improved rare variant imputation in European and Chinese samples
Wen-Chi Chou et al.
SCIENTIFIC REPORTS (2016)
Sequence-based Association Analysis Reveals an MGST1 eQTL with Pleiotropic Effects on Bovine Milk Composition
Mathew D. Littlejohn et al.
SCIENTIFIC REPORTS (2016)
Impact of genetic similarity on imputation accuracy
Nab Raj Roshyara et al.
BMC GENETICS (2015)
Comparison among three variant callers and assessment of the accuracy of imputation from SNP array data to whole-genome sequence level in chicken
Guiyan Ni et al.
BMC GENOMICS (2015)
Choosing Subsamples for Sequencing Studies by Minimizing the Average Distance to the Closest Leaf
Jonathan T. L. Kang et al.
GENETICS (2015)
How imputation errors bias genomic predictions
E. C. G. Pimentel et al.
JOURNAL OF DAIRY SCIENCE (2015)
A global reference for human genetic variation
David M. Altshuler et al.
NATURE (2015)
Choosing Subsamples for Sequencing Studies by Minimizing the Average Distance to the Closest Leaf
Jonathan T. L. Kang et al.
GENETICS (2015)
Improving accuracy of rare variant imputation with a two-step imputation approach
Eskil Kreiner-Moller et al.
EUROPEAN JOURNAL OF HUMAN GENETICS (2015)
Global diversity and genetic contributions of chicken populations from African, Asian and European regions
C. M. Lyimo et al.
ANIMAL GENETICS (2014)
Toward genomic prediction from whole-genome sequence data: impact of sequencing design on genotype imputation and accuracy of predictions
T. Druet et al.
HEREDITY (2014)
Imputation of sequence level genotypes in the Franches-Montagnes horse breed
Mirjam Frischknecht et al.
GENETICS SELECTION EVOLUTION (2014)
Development of a high density 600K SNP genotyping array for chicken
Andreas Kranis et al.
BMC GENOMICS (2013)
Genotype Imputation Reference Panel Selection Using Maximal Phylogenetic Diversity
Peng Zhang et al.
GENETICS (2013)
Minimizing the Average Distance to a Closest Leaf in a Phylogenetic Tree
Frederick A. Matsen et al.
SYSTEMATIC BIOLOGY (2013)
An integrated map of genetic variation from 1,092 human genomes
David M. Altshuler et al.
NATURE (2012)
Differential confounding of rare and common variants in spatially structured populations
Iain Mathieson et al.
NATURE GENETICS (2012)
Imputation of low-frequency variants using the HapMap3 benefits from large, diverse reference sets
Luke Jostins et al.
EUROPEAN JOURNAL OF HUMAN GENETICS (2011)
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
Aaron McKenna et al.
GENOME RESEARCH (2010)
Integrating common and rare genetic variation in diverse human populations
David M. Altshuler et al.
NATURE (2010)
Genotype imputation for genome-wide association studies
Jonathan Marchini et al.
NATURE REVIEWS GENETICS (2010)
Genotype Imputation
Yun Li et al.
ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS (2009)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
Finding the missing heritability of complex diseases
Teri A. Manolio et al.
NATURE (2009)
Efficient Methods to Compute Genomic Predictions
P. M. VanRaden
JOURNAL OF DAIRY SCIENCE (2008)