4.8 Article

Single-Molecule Protein Phosphorylation and Dephosphorylation by Nano ore Enzymology

Journal

ACS NANO
Volume 13, Issue 1, Pages 633-641

Publisher

AMER CHEMICAL SOC
DOI: 10.1021/acsnano.8b07697

Keywords

nanopore enzymology; phosphorylation; protein kinases; single molecule; kinase mechanism; metal ions

Funding

  1. National Institutes of Health
  2. Oxford Nanopore Technologies
  3. Biotechnology and Biological Sciences Research Council
  4. Structural Genomics Consortium from AbbVie [1097737]
  5. Bayer Pharma AG
  6. Boehringer Ingelheim
  7. Canada Foundation for Innovation
  8. Eshelman Institute for Innovation
  9. Genome Canada
  10. Innovative Medicines Initiative (EU/EFPIA) (ULTRA-DD Grant) [115766]
  11. Janssen
  12. Merck KGaA Darmstadt Germany
  13. MSD
  14. Novartis Pharma AG
  15. Ontario Ministry of Economic Development and Innovation
  16. Pfizer
  17. Sao Paulo Research Foundation-FAPESP
  18. Takeda
  19. Wellcome [106169/ZZ14/Z]

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Reversible protein phosphorylation plays a crucial and ubiquitous role in the control of almost all cellular processes. The interplay of protein kinases and phosphatases acting in opposition ensures tight dynamic control of protein phosphorylation states within the cell. Previously, engineered alpha-hemolysin pores bearing kinase substrate peptides have been developed as single-molecule stochastic sensors for protein kinases. Here, we have used these pores to observe, label-free, the phosphorylation and dephosphorylation of a single substrate molecule. Further, we investigated the effect of Mg2+ and Mn2+ upon substrate and product binding and found that Mn2+ relaxes active-site specificity toward nucleotides and enhances product binding. In doing so, we demonstrate the power and versatility of nanopore enzymology to scrutinize a critical post-translational modification.

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