Related references
Note: Only part of the references are listed.Bee conservation in the age of genomics
Jeffrey D. Lozier et al.
CONSERVATION GENETICS (2017)
GenomeScope: fast reference-free genome profiling from short reads
Gregory W. Vurture et al.
BIOINFORMATICS (2017)
An Ecoregion-Based Approach to Protecting Half the Terrestrial Realm
Eric Dinerstein et al.
BIOSCIENCE (2017)
Estimating contemporary effective population size in non-model species using linkage disequilibrium across thousands of loci
R. K. Waples et al.
HEREDITY (2016)
Toward an Upgraded Honey Bee (Apis mellifera L.) Genome Annotation Using Proteogenomics
Alison McAfee et al.
JOURNAL OF PROTEOME RESEARCH (2016)
Status, Threats and Conservation Recommendations for Wild Bumble Bees (Bombus spp.) in Ontario, Canada: A Review for Policymakers and Practitioners
Sheila R. Colla
NATURAL AREAS JOURNAL (2016)
Phased diploid genome assembly with single-molecule real-time sequencing
Chen-Shan Chin et al.
NATURE METHODS (2016)
The genomic landscape of rapid repeated evolutionary adaptation to toxic pollution in wild fish
Noah M. Reid et al.
SCIENCE (2016)
Do managed bees drive parasite spread and emergence in wild bees?
Peter Graystock et al.
INTERNATIONAL JOURNAL FOR PARASITOLOGY-PARASITES AND WILDLIFE (2016)
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
Felipe A. Simao et al.
BIOINFORMATICS (2015)
Commercial Bombus impatiens as reservoirs of emerging infectious diseases in central Mexico
Bernardo Sachman-Ruiz et al.
BIOLOGICAL INVASIONS (2015)
Evaluation of the linkage-disequilibrium method for the estimation of effective population size when generations overlap: an empirical case
Mara Saura et al.
BMC GENOMICS (2015)
Climate change impacts on bumblebees converge across continents
Jeremy T. Kerr et al.
SCIENCE (2015)
A depauperate immune repertoire precedes evolution of sociality in bees
Seth M. Barribeau et al.
GENOME BIOLOGY (2015)
The genomes of two key bumblebee species with primitive eusocial organization
Ben M. Sadd et al.
GENOME BIOLOGY (2015)
PacBio Sequencing and Its Applications
Anthony Rhoads et al.
GENOMICS PROTEOMICS & BIOINFORMATICS (2015)
OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software
Evgenia V. Kriventseva et al.
NUCLEIC ACIDS RESEARCH (2015)
Finding the missing honey bee genes: lessons learned from a genome upgrade
Christine G. Elsik et al.
BMC GENOMICS (2014)
Revisiting comparisons of genetic diversity in stable and declining species: assessing genome-wide polymorphism in North American bumble bees using RAD sequencing
J. D. Lozier
MOLECULAR ECOLOGY (2014)
NEESTIMATOR v2: re-implementation of software for the estimation of contemporary effective population size (Ne) from genetic data
C. Do et al.
MOLECULAR ECOLOGY RESOURCES (2014)
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
Bruce J. Walker et al.
PLOS ONE (2014)
A Virulent Strain of Deformed Wing Virus (DWV) of Honeybees (Apis mellifera) Prevails after Varroa destructor-Mediated, or In Vitro, Transmission
Eugene V. Ryabov et al.
PLOS PATHOGENS (2014)
Detecting Identity by Descent and Estimating Genotype Error Rates in Sequence Data
Brian L. Browning et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2013)
NextGenMap: fast and accurate read mapping in highly polymorphic genomes
Fritz J. Sedlazeck et al.
BIOINFORMATICS (2013)
Detecting Signatures of Selection Through Haplotype Differentiation Among Hierarchically Structured Populations
Maria Ines Fariello et al.
GENETICS (2013)
Reducing assembly complexity of microbial genomes with single-molecule sequencing
Sergey Koren et al.
GENOME BIOLOGY (2013)
Assessing declines of North American bumble bees (Bombus spp.) using museum specimens
Sheila R. Colla et al.
BIODIVERSITY AND CONSERVATION (2012)
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3
Pablo Cingolani et al.
FLY (2012)
Do pathogen spillover, pesticide use, or habitat loss explain recent North American bumblebee declines?
Nora D. Szabo et al.
CONSERVATION LETTERS (2012)
Empirical comparison of single nucleotide polymorphisms and microsatellites for population and demographic analyses of bowhead whales
PA Morin et al.
Endangered Species Research (2012)
A novel hybrid gene prediction method employing protein multiple sequence alignments
Oliver Keller et al.
BIOINFORMATICS (2011)
The variant call format and VCFtools
Petr Danecek et al.
BIOINFORMATICS (2011)
A second generation genetic map of the bumblebee Bombus terrestris (Linnaeus, 1758) reveals slow genome and chromosome evolution in the Apidae
Eckart Stolle et al.
BMC GENOMICS (2011)
How many flowering plants are pollinated by animals?
Jeff Ollerton et al.
OIKOS (2011)
Patterns of widespread decline in North American bumble bees
Sydney A. Cameron et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Genetic estimates of contemporary effective population size in an endangered butterfly indicate a possible role for genetic compensation
Emily V. Saarinen et al.
EVOLUTIONARY APPLICATIONS (2010)
Natural Selection and the Distribution of Identity-by-Descent in the Human Genome
Anders Albrechtsen et al.
GENETICS (2010)
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
Aaron McKenna et al.
GENOME RESEARCH (2010)
Bumblebee vulnerability and conservation world-wide
Paul H. Williams et al.
APIDOLOGIE (2009)
Decline of bumble bees (Bombus) in the North American Midwest
Jennifer C. Grixti et al.
BIOLOGICAL CONSERVATION (2009)
BLAST plus : architecture and applications
Christiam Camacho et al.
BMC BIOINFORMATICS (2009)
Bumblebee Vulnerability: Common Correlates of Winners and Losers across Three Continents
Paul Williams et al.
CONSERVATION BIOLOGY (2009)
Fast model-based estimation of ancestry in unrelated individuals
David H. Alexander et al.
GENOME RESEARCH (2009)
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Da Wei Huang et al.
NATURE PROTOCOLS (2009)
Evidence for decline in eastern North American bumblebees (Hymenoptera: Apidae), with special focus on Bombus affinis Cresson
Sheila R. Colla et al.
BIODIVERSITY AND CONSERVATION (2008)
Does Pathogen Spillover from Commercially Reared Bumble Bees Threaten Wild Pollinators?
Michael C. Otterstatter et al.
PLOS ONE (2008)
PLINK: A tool set for whole-genome association and population-based linkage analyses
Shaun Purcell et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2007)
Importance of pollinators in changing landscapes for world crops
Alexandra-Maria Klein et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2007)
Insights into social insects from the genome of the honeybee Apis mellifera
George M. Weinstock et al.
NATURE (2006)
Plight of the bumble bee: Pathogen spillover from commercial to wild populations
Sheila R. Colla et al.
BIOLOGICAL CONSERVATION (2006)
Population structure and inbreeding in a rare and declining bumblebee, Bombus muscorum (Hymenoptera: Apidae)
B Darvill et al.
MOLECULAR ECOLOGY (2006)
The signature of positive selection on standing genetic variation
M Przeworski et al.
EVOLUTION (2005)
The fragment assembly string graph
EW Myers
BIOINFORMATICS (2005)
Complementary sex determination substantially increases extinction proneness of haplodiploid populations
A Zayed et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Use of diploid male frequency data as an indicator of pollinator decline
A Zayed et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2004)
Effective population size in Hymenoptera with complementary sex determination
A Zayed
HEREDITY (2004)
Gene prediction with a hidden Markov model and a new intron submodel
Mario Stanke et al.
BIOINFORMATICS (2003)