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RNA (2005)
Roles of conserved amino acid sequence motifs in the SpoU (TrmH) RNA methyltransferase family
K Watanabe et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
Mitochondria-specific RNA-modifying enzymes responsible for the biosynthesis of the wobble base in mitochondrial tRNAs - Implications for the molecular pathogenesis of human mitochondrial diseases
N Umeda et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
Identification of a novel gene encoding a flavin-dependent tRNA : m(5)U methyltransferase in bacteria - evolutionary implications
J Urbonavicius et al.
NUCLEIC ACIDS RESEARCH (2005)
Modification at position 9 with 1-methyladenosine is crucial for structure and function of nematode mitochondrial tRNAs lacking the entire T-arm
M Sakurai et al.
NUCLEIC ACIDS RESEARCH (2005)
Deep knot structure for construction of active site and cofactor binding site of tRNA modification enzyme
O Nureki et al.
STRUCTURE (2004)
Characterization of Streptococcus pneumoniae TrmD, a tRNA methyltransferase essential for growth
K O'Dwyer et al.
JOURNAL OF BACTERIOLOGY (2004)
N2-methylation of guanosine at position 10 in tRNA is catalyzed by a THUMP domain-containing, S-adenosylmethionine-dependent methyltransferase, conserved in Archaea and Eukaryota
J Armengaud et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Identification of a bifunctional enzyme MnmC involved in the biosynthesis of a hypermodified uridine in the wobble position of tRNA
JM Bujnicki et al.
RNA (2004)
Mutations in the FTSJ1 gene coding for a novel S-adenosylmethionine- binding protein cause nonsyndromic X-linked mental retardation
K Freude et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2004)
Isolation and characterization of the human tRNA-(NIG37) methyltransferase (TRM5) and comparison to the Escherichia coli TrmD protein
H Brulé et al.
BIOCHEMISTRY (2004)
Substrate tRNA recognition mechanism of tRNA (m7G46) methyltransferase from Aquifex aeolicus
H Okamoto et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Sequential 2′-O-methylation of archaeal pre-tRNATrp nucleotides is guided by the intron-encoded but trans-acting box c/D ribonucleoprotein of pre-tRNA
KS Sanjay et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Distinct origins of tRNA(M1G37) methyltransferase
T Christian et al.
JOURNAL OF MOLECULAR BIOLOGY (2004)
A primordial RNA modification enzyme: the case of tRNA (m(1)A) methyltransferase
M Roovers et al.
NUCLEIC ACIDS RESEARCH (2004)
Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S-cerevisiae
S Kadaba et al.
GENES & DEVELOPMENT (2004)
The modified wobble nucleoside uridine-5-oxyacetic acid in tRNAcmo5UGGPro promotes reading of all four proline codons in vivo
SJ Näsvall et al.
RNA (2004)
Novel methyltransferase for modified uridine residues at the wobble position of tRNA
HR Kalhor et al.
MOLECULAR AND CELLULAR BIOLOGY (2003)
Roles of 5-substituents of tRNA wobble uridines in the recognition of purine-ending codons
K Takai et al.
NUCLEIC ACIDS RESEARCH (2003)
In vitro RNP assembly and methylation guide activity of an unusual box C/D RNA, cis-acting archaeal pre-tRNATrp
ML Bortolin et al.
NUCLEIC ACIDS RESEARCH (2003)
Insights into catalysis by a knotted TrmD tRNA methyltransferase
PA Elkins et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
MiaB protein from Thermotoga maritima -: Characterization of an extremely thermophilic tRNA-methylthiotransferase
F Pierrel et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
The thermodynamic stability of RNA duplexes and hairpins containing N6-alkyladenosines and 2-methylthio-N6-alkyladenosines
E Kierzek et al.
NUCLEIC ACIDS RESEARCH (2003)
Aquifex aeolicus tRNA (Gm18) methyltransferase has unique substrate specificity -: tRNA recognition mechanism of the enzyme
H Hori et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
Crystal structure of tRNA(m1G37)methyltransferase:: insights into tRNA recognition
HJ Ahn et al.
EMBO JOURNAL (2003)
Transfer RNA modifications that alter+1 frameshifting in general fail to affect-1 frameshifting
J Urbonavicius et al.
RNA (2003)
Many paths to methyltransfer: a chronicle of convergence
HL Schubert et al.
TRENDS IN BIOCHEMICAL SCIENCES (2003)
Identification of the yeast gene encoding the tRNA m1G methyltransferase responsible for modification at position 9
JE Jackman et al.
RNA (2003)
The yggH gene of Escherichia coli encodes a tRNA (m7G46) methyltransferase
LGS De Bie et al.
JOURNAL OF BACTERIOLOGY (2003)
Cloning and characterization of tRNA (m1A58) methyltransferase (TrmI) from Thermus thermophilus HB27, a protein required for cell growth at extreme temperatures
L Droogmans et al.
NUCLEIC ACIDS RESEARCH (2003)
Structure of the YibK methyltransferase from Haemophilus influenzae (HI0766):: A cofactor bound at a site formed by a knot
K Lim et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2003)
Wobble modification differences and subcellular localization of tRNAs in Leishmania tarentolae:: implication for tRNA sorting mechanism
T Kaneko et al.
EMBO JOURNAL (2003)
Biosynthesis of the 7-deazaguanosine hypermodified nucleosides of transfer RNA
D Iwata-Reuyl
BIOORGANIC CHEMISTRY (2003)
Crystal structure of tRNA (m1G37) methyltransferase from Aquifex aeolicus at 2.6 angstrom resolution: A novel methyltransferase fold
JY Liu et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2003)
Taurine as a constituent of mitochondrial tRNAs: new insights into the functions of taurine and human mitochondrial diseases
T Suzuki et al.
EMBO JOURNAL (2002)
Conserved bases in the TΨC loop of tRNA are determinants for thermophile-specific 2-thiouridylation at position 54
N Shigi et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Cytoplasmic serine hydroxymethyltransferase mediates competition between folate-dependent deoxyribonucleotide and S-adenosylmethionine biosyntheses
K Herbig et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Three modifications in the D and T arms of tRNA influence translation in Escherichia coli and expression of virulence genes in Shigella flexneri
J Urbonavicius et al.
JOURNAL OF BACTERIOLOGY (2002)
Two proteins that form a complex are required for 7-methylguanosine modification of yeast tRNA
A Alexandrov et al.
RNA (2002)
RNA Methyltransferases utilize two cysteine residues in the formation of 5-methylcytosine
MY King et al.
BIOCHEMISTRY (2002)
RNA editing by adenosine deaminases generates RNA and protein diversity
M Schaub et al.
BIOCHIMIE (2002)
Trm7p catalyses the formation of two 2′-O-methylriboses in yeast tRNA anticodon loop
L Pintard et al.
EMBO JOURNAL (2002)
Dual function of the tRNA(m(5)U(54))methyltransferase in tRNA maturation
MJO Johansson et al.
RNA (2002)
Identification and characterization of tRNA (Gm18) methyltransferase from Thermus thermophilus HB8: domain structure and conserved amino acid sequence motifs
H Hori et al.
GENES TO CELLS (2002)
Box C/D RNA guides for the ribose methylation of archaeal tRNAs. The tRNATrp intron guides the formation of two ribose-methylated nucleosides in the mature tRNATrp
BC d'Orval et al.
NUCLEIC ACIDS RESEARCH (2001)
Improvement of reading frame maintenance is a common function for several tRNA modifications
J Urbonavicius et al.
EMBO JOURNAL (2001)
Wobble modification defect in tRNA disturbs codon-anticodon interaction in a mitochondrial disease
T Yasukawa et al.
EMBO JOURNAL (2001)
The miaA mutator phenotype of Escherichia coli K-12 requires recombination functions
JY Zhao et al.
JOURNAL OF BACTERIOLOGY (2001)
A primordial tRNA modification required for the evolution of life?
GR Björk et al.
EMBO JOURNAL (2001)
Structure of human DNMT2, an enigmatic DNA methyltransferase homolog that displays denaturant-resistant binding to DNA
AP Dong et al.
NUCLEIC ACIDS RESEARCH (2001)
The human tRNA(m22G26)dimethyltransferase:: functional expression and characterization of a cloned hTRM1 gene
JM Liu et al.
NUCLEIC ACIDS RESEARCH (2000)
Identification of the TRM2 gene encoding the tRNA(m5U54) methyltransferase of Saccharomyces cerevisiae
ME Nordlund et al.
RNA (2000)
The Gcd10p/Gcd14p complex is the essential two-subunit tRNA(1-methyladenosine) methyltransferase of Saccharomyces cerevisiae
J Anderson et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)
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