4.7 Article

Open science resources for the discovery and analysis of Tara Oceans data

Journal

SCIENTIFIC DATA
Volume 2, Issue -, Pages -

Publisher

NATURE PUBLISHING GROUP
DOI: 10.1038/sdata.2015.23

Keywords

-

Funding

  1. CNRS [GDR3280]
  2. European Molecular Biology Laboratory (EMBL)
  3. Genoscope/CEA
  4. Fund for Scientific Research-Flanders
  5. VIB
  6. Stazione Zoologica Anton Dohrn
  7. UNIMIB
  8. ANR [POSEIDON/ANR-09-BLAN-0348, BIOMARKS/ANR-08-BDVA- 003, PROMETHEUS/ANR-09-GENM-031, PROMETHEUS/ANR-09-PCS-GENM-217, TARAGIRUS/ANR-09-PCS-GENM-218, OCEANOMICS/ANR-11-BTBR-0008, FRANCE GENOMIQUE/ANR-10-INBS-09-08]
  9. EU [287589, IHMS/HEALTH-F4-2010-261376, MetaCardis/HEALTH-F4-2012-305312]
  10. ERC [Diatomite: 294823, CancerBiome: 268985]
  11. Spanish Ministry of Science and Innovation [CGL2011-26848/BOS MicroOcean PANGENOMICS]
  12. JSPS KAKENHI Grant [26430184]
  13. FWO
  14. BIO5
  15. Biosphere 2, agne's b.
  16. Veolia Environment Foundation
  17. Region Bretagne
  18. World Courier
  19. Illumina
  20. Cap L'Orient
  21. EDF Foundation EDF Diversiterre
  22. FRB
  23. Prince Albert II de Monaco Foundation
  24. Etienne Bourgois
  25. Tara schooner

Ask authors/readers for more resources

The Tara Oceans expedition (2009-2013) sampled contrasting ecosystems of the world oceans, collecting environmental data and plankton, from viruses to metazoans, for later analysis using modern sequencing and state-of-the-art imaging technologies. It surveyed 210 ecosystems in 20 biogeographic provinces, collecting over 35,000 samples of seawater and plankton. The interpretation of such an extensive collection of samples in their ecological context requires means to explore, assess and access raw and validated data sets. To address this challenge, the Tara Oceans Consortium offers open science resources, including the use of open access archives for nucleotides (ENA) and for environmental, biogeochemical, taxonomic and morphological data (PANGAEA), and the development of on line discovery tools and collaborative annotation tools for sequences and images. Here, we present an overview of Tara Oceans Data, and we provide detailed registries (data sets) of all campaigns (from port-to-port), stations and sampling events.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.7
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

No Data Available
No Data Available