4.2 Article

fMRI Artefact Rejection and Sleep Scoring Toolbox

Journal

COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE
Volume 2011, Issue -, Pages -

Publisher

HINDAWI LTD
DOI: 10.1155/2011/598206

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Funding

  1. Fonds de la Recherche Scientifique-FNRS
  2. Queen Elizabeth's funding
  3. University of Liege

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We started writing the fMRI artefact rejection and sleep scoring toolbox, or FAST, to process our sleep EEG-fMRI data, that is, the simultaneous recording of electroencephalographic and functional magnetic resonance imaging data acquired while a subject is asleep. FAST tackles three crucial issues typical of this kind of data: (1) data manipulation (viewing, comparing, chunking, etc.) of long continuous M/EEG recordings, (2) rejection of the fMRI-induced artefact in the EEG signal, and (3) manual sleep-scoring of the M/EEG recording. Currently, the toolbox can efficiently deal with these issues via a GUI, SPM8 batching system or handwritten script. The tools developed are, of course, also useful for other EEG applications, for example, involving simultaneous EEG-fMRI acquisition, continuous EEG eye-balling, and manipulation. Even though the toolbox was originally devised for EEG data, it will also gracefully handle MEG data without any problem. FAST is developed in Matlab as an add-on toolbox for SPM8 and, therefore, internally uses its SPM8-meeg data format. FAST is available for free, under the GNU-GPL.

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