Related references
Note: Only part of the references are listed.Unique DNA methylome profiles in CpG island methylator phenotype colon cancers
Yaomin Xu et al.
GENOME RESEARCH (2012)
Regions of focal DNA hypermethylation and long-range hypomethylation in colorectal cancer coincide with nuclear lamina-associated domains
Benjamin P. Berman et al.
NATURE GENETICS (2012)
A promoter DNA demethylation landscape of human hematopoietic differentiation
Vincenzo Calvanese et al.
NUCLEIC ACIDS RESEARCH (2012)
RSEQtools: a modular framework to analyze RNA-Seq data using compact, anonymized data summaries
Lukas Habegger et al.
BIOINFORMATICS (2011)
Genome-wide Methylation Analysis Identifies Genes Specific to Breast Cancer Hormone Receptor Status and Risk of Recurrence
Mary Jo Fackler et al.
CANCER RESEARCH (2011)
5-Hydroxymethylcytosine Is Strongly Depleted in Human Cancers but Its Levels Do Not Correlate with IDH1 Mutations
Seung-Gi Jin et al.
CANCER RESEARCH (2011)
TET Family Proteins and Their Role in Stem Cell Differentiation and Transformation
Luisa Cimmino et al.
CELL STEM CELL (2011)
Absence of Runx3 expression in normal gastrointestinal epithelium calls into question its tumour suppressor function
Ditsa Levanon et al.
EMBO MOLECULAR MEDICINE (2011)
CpG islands and the regulation of transcription
Aimee M. Deaton et al.
GENES & DEVELOPMENT (2011)
Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
Moran N. Cabili et al.
GENES & DEVELOPMENT (2011)
DNA methylation profiling reveals novel biomarkers and important roles for DNA methyltransferases in prostate cancer
Yuya Kobayashi et al.
GENOME RESEARCH (2011)
What fraction of the human genome is functional?
Chris P. Ponting et al.
GENOME RESEARCH (2011)
Sequential DNA methylation changes are associated with DNMT3B overexpression in colorectal neoplastic progression
Ashraf E. K. Ibrahim et al.
GUT (2011)
Molecular Mechanisms of Long Noncoding RNAs
Kevin C. Wang et al.
MOLECULAR CELL (2011)
Integrated genomic analyses of ovarian carcinoma
D. Bell et al.
NATURE (2011)
Gene silencing in X-chromosome inactivation: advances in understanding facultative heterochromatin formation
Anton Wutz
NATURE REVIEWS GENETICS (2011)
COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer
Simon A. Forbes et al.
NUCLEIC ACIDS RESEARCH (2011)
Transcriptionally repressed genes become aberrantly methylated and distinguish tumors of different lineages in breast cancer
Duncan Sproul et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Breast Cancer Methylomes Establish an Epigenomic Foundation for Metastasis
Fang Fang et al.
SCIENCE TRANSLATIONAL MEDICINE (2011)
Generation of bivalent chromatin domains during cell fate decisions
Marco De Gobbi et al.
EPIGENETICS & CHROMATIN (2011)
A decade of exploring the cancer epigenome - biological and translational implications
Stephen B. Baylin et al.
NATURE REVIEWS CANCER (2011)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Enzymatic approaches and bisulfite sequencing cannot distinguish between 5-methylcytosine and 5-hydroxymethylcytosine in DNA
Colm Nestor et al.
BIOTECHNIQUES (2010)
Identification of a CpG Island Methylator Phenotype that Defines a Distinct Subgroup of Glioma
Houtan Noushmehr et al.
CANCER CELL (2010)
Leukemic IDH1 and IDH2 Mutations Result in a Hypermethylation Phenotype, Disrupt TET2 Function, and Impair Hematopoietic Differentiation
Maria E. Figueroa et al.
CANCER CELL (2010)
General Transcription Factor Binding at CpG Islands in Normal Cells Correlates with Resistance to De novo DNA Methylation in Cancer Cells
Claudia Gebhard et al.
CANCER RESEARCH (2010)
Genome architecture marked by retrotransposons modulates predisposition to DNA methylation in cancer
Marcos R. H. Estecio et al.
GENOME RESEARCH (2010)
Array-Based DNA Methylation Profiling for Breast Cancer Subtype Discrimination
Ilse Van der Auwera et al.
PLOS ONE (2010)
Orphan CpG Islands Identify Numerous Conserved Promoters in the Mammalian Genome
Robert S. Illingworth et al.
PLOS GENETICS (2010)
The Hox genes and their roles in oncogenesis
Nilay Shah et al.
NATURE REVIEWS CANCER (2010)
Adenomatous polyposis coli 1A is likely to be methylated as a passenger in human gastric carcinogenesis
Kosuke Hosoya et al.
CANCER LETTERS (2009)
Lessons from comparative analysis of X-chromosome inactivation in mammals
Ikuhiro Okamoto et al.
CHROMOSOME RESEARCH (2009)
DNMT3B Expression Might Contribute to CpG Island Methylator Phenotype in Colorectal Cancer
Katsuhiko Nosho et al.
CLINICAL CANCER RESEARCH (2009)
Dnmt3/transcription factor interactions as crucial players in targeted DNA methylation
Eric Hervouet et al.
EPIGENETICS (2009)
CpG island methylator phenotype, microsatellite instability, BRAF mutation and clinical outcome in colon cancer
Shuji Ogino et al.
GUT (2009)
The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores
Rafael A. Irizarry et al.
NATURE GENETICS (2009)
Aberrant luminal progenitors as the candidate target population for basal tumor development in BRCA1 mutation carriers
Elgene Lim et al.
NATURE MEDICINE (2009)
Non-coding RNAs in Polycomb/Trithorax regulation
Betuel Hekimoglu et al.
RNA BIOLOGY (2009)
The Nuclear DNA Base 5-Hydroxymethylcytosine Is Present in Purkinje Neurons and the Brain
Skirmantas Kriaucionis et al.
SCIENCE (2009)
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Ben Langmead et al.
GENOME BIOLOGY (2009)
Do 'basal-like' breast cancers really exist?
Barry Gusterson
NATURE REVIEWS CANCER (2009)
CpG island methylator phenotype (CIMP) in cancer: Causes and implications
Jens M. Teodoridis et al.
CANCER LETTERS (2008)
Alternative isoform regulation in human tissue transcriptomes
Eric T. Wang et al.
NATURE (2008)
What is principal component analysis?
Markus Ringner
NATURE BIOTECHNOLOGY (2008)
Defining diversity, specialization, and gene specificity in transcriptomes through information theory
Octavio Martinez et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Dnmt3b promotes tumorigenesis in vivo by gene-specific de novo methylation and transcriptional silencing
Heinz G. Linhart et al.
GENES & DEVELOPMENT (2007)
A stem cell-like chromatin pattern may predispose tumor suppressor genes to DNA hypermethylation and heritable silencing
Joyce E. Ohm et al.
NATURE GENETICS (2007)
Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome
Michael Weber et al.
NATURE GENETICS (2007)
CpG island methylator phenotype-low (CIMP-Low) in colorectal cancer:: Possible associations with male sex and KRAS mutations
Shuji Ogino et al.
JOURNAL OF MOLECULAR DIAGNOSTICS (2006)
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
BE Bernstein et al.
CELL (2006)
G9a-mediated irreversible epigenetic inactivation of Oct-3/4 during early embryogenesis
N Feldman et al.
NATURE CELL BIOLOGY (2006)
Genome-wide identification of human functional DNA using a neutral indel model
Gerton Lunter et al.
PLOS COMPUTATIONAL BIOLOGY (2006)
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
A Siepel et al.
GENOME RESEARCH (2005)
Interpreting expression profiles of cancers by genome-wide survey of breadth of expression in normal tissues
XJ Ge et al.
GENOMICS (2005)
Myc represses transcription through recruitment of DNA methyltransferase corepressor
C Brenner et al.
EMBO JOURNAL (2005)
Long-range control of gene expression: Emerging mechanisms and disruption in disease
DA Kleinjan et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2005)
Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data
MH Dai et al.
NUCLEIC ACIDS RESEARCH (2005)
De novo DNA methylation is dispensable for the initiation and propagation of X chromosome inactivation
T Sado et al.
DEVELOPMENT (2004)
Mutations in proto-oncogene GFI1 cause human neutropenia and target ELA2
RE Person et al.
NATURE GENETICS (2003)
DNA methylation patterns and epigenetic memory
A Bird
GENES & DEVELOPMENT (2002)
Inflammatory reactions and severe neutropenia in mice lacking the transcriptional repressor Gfi1
H Karsunky et al.
NATURE GENETICS (2002)
X inactivation in the mouse embryo deficient for Dnmt1: Distinct effect of hypomethylation on imprinted and random X inactivation
T Sado et al.
DEVELOPMENTAL BIOLOGY (2000)