Journal
GENOME BIOLOGY
Volume 11, Issue 3, Pages -Publisher
BIOMED CENTRAL LTD
DOI: 10.1186/gb-2010-11-3-r34
Keywords
-
Funding
- Swedish Natural Sciences Research Council
Ask authors/readers for more resources
We have developed a new strategy for de novo prediction of splice junctions in short-read RNA-seq data, suitable for detection of novel splicing events and chimeric transcripts. When tested on mouse RNA-seq data, > 31,000 splice events were predicted, of which 88% bridged between two regions separated by <= 100 kb, and 74% connected two exons of the same RefSeq gene. Our method also reports genomic rearrangements such as insertions and deletions.
Authors
I am an author on this paper
Click your name to claim this paper and add it to your profile.
Reviews
Recommended
No Data Available