4.6 Article

A Comparative Analysis of Microbial DNA Preparation Methods for Use With Massive and Branching Coral Growth Forms

Related references

Note: Only part of the references are listed.
Review Biochemistry & Molecular Biology

Defining the Core Microbiome in Corals' Microbial Soup

Alejandra Hernandez-Agreda et al.

TRENDS IN MICROBIOLOGY (2017)

Article Microbiology

Practical considerations for large-scale gut microbiome studies

Doris Vandeputte et al.

FEMS MICROBIOLOGY REVIEWS (2017)

Review Microbiology

Insights into the Coral Microbiome: Underpinning the Health and Resilience of Reef Ecosystems

David G. Bourne et al.

ANNUAL REVIEW OF MICROBIOLOGY, VOL 70 (2016)

Article Biotechnology & Applied Microbiology

A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling

Rosalinda D'Amore et al.

BMC GENOMICS (2016)

Editorial Material Multidisciplinary Sciences

Corals' microbial sentinels The coral microbiome will be key to future reef health

Tracy D. Ainsworth et al.

SCIENCE (2016)

Article Multidisciplinary Sciences

Climate change disables coral bleaching protection on the Great Barrier Reef

Tracy D. Ainsworth et al.

SCIENCE (2016)

Article Biotechnology & Applied Microbiology

Flow cytometric sorting of fecal bacteria after in situ hybridization with polynucleotide probes

Lena M. Bruder et al.

SYSTEMATIC AND APPLIED MICROBIOLOGY (2016)

Article Biotechnology & Applied Microbiology

Differences in Bacterial Community Structure in Two Color Morphs of the Hawaiian Reef Coral Montipora capitata

Amanda Shore-Maggio et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)

Article Biochemistry & Molecular Biology

The coral immune response facilitates protection against microbes during tissue regeneration

Jeroen A. J. M. van de Water et al.

MOLECULAR ECOLOGY (2015)

Article Multidisciplinary Sciences

The functional gene composition and metabolic potential of coral-associated microbial communities

Yanying Zhang et al.

SCIENTIFIC REPORTS (2015)

Article Ecology

Microbiota of the Major South Atlantic Reef Building Coral Mussismilia

Samodha C. Fernando et al.

MICROBIAL ECOLOGY (2015)

Article Biochemical Research Methods

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

Paul J. McMurdie et al.

PLOS COMPUTATIONAL BIOLOGY (2014)

Article Microbiology

Comparison of DNA preservation methods for environmental bacterial community samples

Michael A. Gray et al.

FEMS MICROBIOLOGY ECOLOGY (2013)

Article Multidisciplinary Sciences

DMSP biosynthesis by an animal and its role in coral thermal stress response

Jean-Baptiste Raina et al.

NATURE (2013)

Article Biotechnology & Applied Microbiology

Specificity of Associations between Bacteria and the Coral Pocillopora meandrina during Early Development

Amy Apprill et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)

Review Biochemistry & Molecular Biology

Next-generation sequencing technologies for environmental DNA research

Shadi Shokralla et al.

MOLECULAR ECOLOGY (2012)

Article Multidisciplinary Sciences

Defining the core Arabidopsis thaliana root microbiome

Derek S. Lundberg et al.

NATURE (2012)

Article Multidisciplinary Sciences

PCR Biases Distort Bacterial and Archaeal Community Structure in Pyrosequencing Datasets

Ameet J. Pinto et al.

PLOS ONE (2012)

Article Biochemical Research Methods

UCHIME improves sensitivity and speed of chimera detection

Robert C. Edgar et al.

BIOINFORMATICS (2011)

Article Microbiology

Microbial phylogeny and diversity: Small subunit ribosomal RNA sequence analysis and beyond

J. Rajendhran et al.

MICROBIOLOGICAL RESEARCH (2011)

Article Zoology

Coral-Associated Bacterial Assemblages: Current Knowledge and the Potential for Climate-Driven Impacts

Morgan E. Mouchka et al.

INTEGRATIVE AND COMPARATIVE BIOLOGY (2010)

Letter Biochemical Research Methods

QIIME allows analysis of high-throughput community sequencing data

J. Gregory Caporaso et al.

NATURE METHODS (2010)

Article Evolutionary Biology

A hands-on overview of tissue preservation methods for molecular genetic analyses

Zoltan Tamas Nagy

ORGANISMS DIVERSITY & EVOLUTION (2010)

Review Biochemistry & Molecular Biology

Microbial community profiling for human microbiome projects: Tools, techniques, and challenges

Micah Hamady et al.

GENOME RESEARCH (2009)

Article Multidisciplinary Sciences

Microbial Ecology of Four Coral Atolls in the Northern Line Islands

Elizabeth A. Dinsdale et al.

PLOS ONE (2008)

Article Biotechnology & Applied Microbiology

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

Qiong Wang et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)

Article Biochemical Research Methods

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

Weizhong Li et al.

BIOINFORMATICS (2006)

Article Biotechnology & Applied Microbiology

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

T. Z. DeSantis et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)

Article Biotechnology & Applied Microbiology

Fluorescence in situ hybridization and spectral imaging of coral-associated bacterial communities

TD Ainsworth et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)

Article Biotechnology & Applied Microbiology

Histopathological methods for the investigation of microbial communities associated with disease lesions in reef corals

JC Bythell et al.

LETTERS IN APPLIED MICROBIOLOGY (2002)