Related references
Note: Only part of the references are listed.Trehalose/2-sulfotrehalose biosynthesis and glycine-betaine uptake are widely spread mechanisms for osmoadaptation in the Halobacteriales
Noha H. Youssef et al.
ISME JOURNAL (2014)
An experimental point of view on hydration/solvation in halophilic proteins
Romain Talon et al.
FRONTIERS IN MICROBIOLOGY (2014)
PhyloSift: phylogenetic analysis of genomes and metagenomes
Aaron E. Darling et al.
PEERJ (2014)
ProP Is Required for the Survival of Desiccated Salmonella enterica Serovar Typhimurium Cells on a Stainless Steel Surface
Sarah Finn et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Hydration shells with a pinch of salt
Giuseppe Zaccai
BIOPOLYMERS (2013)
JContextExplorer: a tree-based approach to facilitate cross-species genomic context comparison
Phillip Seitzer et al.
BMC BIOINFORMATICS (2013)
Systems biology-based approaches toward understanding drought tolerance in food crops
Sudisha Jogaiah et al.
CRITICAL REVIEWS IN BIOTECHNOLOGY (2013)
An Extremely Halophilic Proteobacterium Combines a Highly Acidic Proteome with a Low Cytoplasmic Potassium Content
Ratnakar Deole et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2013)
A Role for Programmed Cell Death in the Microbial Loop
Monica V. Orellana et al.
PLOS ONE (2013)
Systematic Identification of Gene Families for Use as Markers for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
Dongying Wu et al.
PLOS ONE (2013)
A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T
Shivakumara Siddaramappa et al.
BMC GENOMICS (2012)
Microbial Lifestyle and Genome Signatures
Chitra Dutta et al.
CURRENT GENOMICS (2012)
Significance of hyponatremia in heart failure
Luca Bettari et al.
HEART FAILURE REVIEWS (2012)
De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities
Priya Narasingarao et al.
ISME JOURNAL (2012)
Complete Genome Sequence of the Metabolically Versatile Halophilic Archaeon Haloferax mediterranei, a Poly(3-Hydroxybutyrate-co-3-Hydroxyvalerate) Producer
Jing Han et al.
JOURNAL OF BACTERIOLOGY (2012)
Genome Sequence of the Halophilic Archaeon Halococcus hamelinensis
Brendan P. Burns et al.
JOURNAL OF BACTERIOLOGY (2012)
Structural basis for translation termination by archaeal RF1 and GTP-bound EF1α complex
Kan Kobayashi et al.
NUCLEIC ACIDS RESEARCH (2012)
Sequencing of Seven Haloarchaeal Genomes Reveals Patterns of Genomic Flux
Erin A. Lynch et al.
PLOS ONE (2012)
An Integrated Pipeline for de Novo Assembly of Microbial Genomes
Andrew Tritt et al.
PLOS ONE (2012)
Acquisition of 1,000 eubacterial genes physiologically transformed a methanogen at the origin of Haloarchaea
Shijulal Nelson-Sathi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Aquaporins in sperm osmoadaptation: an emerging role for volume regulation
Qi Chen et al.
ACTA PHARMACOLOGICA SINICA (2011)
Osmoadaptive Strategies of the Archaeon Halococcus hamelinensis Isolated from a Hypersaline Stromatolite Environment
Falicia Goh et al.
ASTROBIOLOGY (2011)
ProtTest 3: fast selection of best-fit models of protein evolution
Diego Darriba et al.
BIOINFORMATICS (2011)
Temperature and pH optima of extremely halophilic archaea: a mini-review
Karen J. Bowers et al.
EXTREMOPHILES (2011)
Genome Sequence of Halobiforma lacisalsi AJ5, an Extremely Halophilic Archaeon Which Harbors a bop Gene
Xiawei Jiang et al.
JOURNAL OF BACTERIOLOGY (2011)
Arg149 Is Involved in Switching the Low Affinity, Open State of the Binding Protein AfProX into Its High Affinity, Closed State
Britta Tschapek et al.
JOURNAL OF MOLECULAR BIOLOGY (2011)
Niche adaptation by expansion and reprogramming of general transcription factors
Serdar Turkarslan et al.
MOLECULAR SYSTEMS BIOLOGY (2011)
Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy
Ivica Letunic et al.
NUCLEIC ACIDS RESEARCH (2011)
Archaeal phylogenomics provides evidence in support of a methanogenic origin of the Archaea and a thaumarchaeal origin for the eukaryotes
S. Kelly et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2011)
Functional Genomic and Advanced Genetic Studies Reveal Novel Insights into the Metabolism, Regulation, and Biology ofHaloferax volcanii
Jörg Soppa
ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL (2011)
Potassium and sodium transport in non-animal cells: the Trk/Ktr/HKT transporter family
C. Corratge-Faillie et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2010)
The survival of Listeria monocytogenes during long term desiccation is facilitated by sodium chloride and organic material
Birte Fonnesbech Vogel et al.
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2010)
Further refinement of the phylogeny of the Halobacteriaceae based on the full-length RNA polymerase subunit B′ (rpoB′) gene
Hiroaki Minegishi et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Complete Genome Sequence of Halalkalicoccus jeotgali B3T, an Extremely Halophilic Archaeon
Seong Woon Roh et al.
JOURNAL OF BACTERIOLOGY (2010)
Functional Analysis of the Three TATA Binding Protein Homologs in Methanosarcina acetivorans
Matthew J. Reichlen et al.
JOURNAL OF BACTERIOLOGY (2010)
GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes
Amrita Pati et al.
NATURE METHODS (2010)
Evolution of diverse cell division and vesicle formation systems in Archaea
Kira S. Makarova et al.
NATURE REVIEWS MICROBIOLOGY (2010)
The Complete Genome Sequence of Haloferax volcanii DS2, a Model Archaeon
Amber L. Hartman et al.
PLOS ONE (2010)
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
Stephane Guindon et al.
SYSTEMATIC BIOLOGY (2010)
Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition
Andrew Adey et al.
GENOME BIOLOGY (2010)
Emended descriptions of genera of the family Halobacteriaceae
Aharon Oren et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
Morgan N. Price et al.
MOLECULAR BIOLOGY AND EVOLUTION (2009)
X-ray Structure of the C-Terminal Domain of a Prokaryotic Cation-Chloride Cotransporter
Stefan Warmuth et al.
STRUCTURE (2009)
The molecular basis of salt adaptation in Methanosarcina mazei Go1
Regina Spanheimer et al.
ARCHIVES OF MICROBIOLOGY (2008)
Variations in the multiple tbp genes in different Halobacterium salinarum strains and their expression during growth
Katharina Teufel et al.
ARCHIVES OF MICROBIOLOGY (2008)
Genomics and functional genomics with haloarchaea
J. Soppa et al.
ARCHIVES OF MICROBIOLOGY (2008)
BioJava:: an open-source framework for bioinformatics
R. C. G. Holland et al.
BIOINFORMATICS (2008)
The RAST server: Rapid annotations using subsystems technology
Ramy K. Aziz et al.
BMC GENOMICS (2008)
Metabolism of halophilic archaea
Michaela Falb et al.
EXTREMOPHILES (2008)
Gene expression profiling in brain following acute systemic hypertonicity: novel genes possibly involved in osmoadaptation
Said Maallem et al.
JOURNAL OF NEUROCHEMISTRY (2008)
Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota
Celine Brochier-Armanet et al.
NATURE REVIEWS MICROBIOLOGY (2008)
The quest for orthologs: finding the corresponding gene across genomes
Arnold Kuzniar et al.
TRENDS IN GENETICS (2008)
Choosing BLAST options for better detection of orthologs as reciprocal best hits
Gabriel Moreno-Hagelsieb et al.
BIOINFORMATICS (2008)
Genetic and transcriptomic analysis of transcription factor genes in the model halophilic Archaeon: coordinate action of TbpD and TfbA
James A. Coker et al.
BMC GENETICS (2007)
General transcription factor specified global gene regulation in archaea
Marc T. Facciotti et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
HMG-CoA reductase is regulated by salinity at the level of transcription in Haloferax volcanii
Kelly A. Bidle et al.
EXTREMOPHILES (2007)
Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation
Ivica Letunic et al.
BIOINFORMATICS (2007)
The genome of the square archaeon Haloquadratum walsbyi :: life at the limits of water activity
Henk Bolhuis et al.
BMC GENOMICS (2006)
PHY•FI:: fast and easy online creation and manipulation of phylogeny color figures
Jakob Fredslund
BMC BIOINFORMATICS (2006)
From genomes to function: haloarchaea as model organisms
J Soppa
MICROBIOLOGY-SGM (2006)
The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling
K Arnold et al.
BIOINFORMATICS (2006)
LadR, a new PadR-related transcriptional regulator from Listeria monocytogenes, negatively regulates the expression of the multidrug efflux pump MdrL
E Huillet et al.
FEMS MICROBIOLOGY LETTERS (2006)
Horizontal gene transfer, genome innovation and evolution
JP Gogarten et al.
NATURE REVIEWS MICROBIOLOGY (2005)
Secondary active transport mediated by a prokaryotic homologue of ClC Cl- channels
A Accardi et al.
NATURE (2004)
APE: Analyses of Phylogenetics and Evolution in R language
E Paradis et al.
BIOINFORMATICS (2004)
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
RC Edgar
BMC BIOINFORMATICS (2004)
Evolution of the RNA polymerase B′ subunit gene (rpoB′) in Halobacteriales:: a complementary molecular marker to the SSU rRNA gene
DA Walsh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2004)
Taxonomic problems arising in the genera Haloterrigena and Natrinema
BJ Tindall
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2003)
Metabolism of chloride in halophilic prokaryotes
V Müller et al.
EXTREMOPHILES (2003)
Disorders of body water homeostasis
JG Verbalis
BEST PRACTICE & RESEARCH CLINICAL ENDOCRINOLOGY & METABOLISM (2003)
The source of laterally transferred genes in bacterial genomes
V Daubin et al.
GENOME BIOLOGY (2003)
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
K Katoh et al.
NUCLEIC ACIDS RESEARCH (2002)
A novel mode of sensory transduction in archaea: binding protein-mediated chemotaxis towards osmoprotectants and amino acids
MV Kokoeva et al.
EMBO JOURNAL (2002)
An efficient algorithm for large-scale detection of protein families
AJ Enright et al.
NUCLEIC ACIDS RESEARCH (2002)
Osmosensing and osmoregulatory compatible solute accumulation by bacteria
JM Wood et al.
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY (2001)
Whole proteome pl values correlate with subcellular localizations of proteins for organisms within the three domains of life
R Schwartz et al.
GENOME RESEARCH (2001)
Transfer of Natrialba asiatica B1T to Natrialba taiwanensis sp nov and description of Natrialba aegyptiaca sp nov., a novel extremely halophilic, aerobic, non-pigmented member of the Archaea from Egypt that produces extracellular poly(glutamic acid)
FF Hezayen et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2001)
Genome sequence of Halobacterium species NRC-1
WV Ng et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)
Halophilic adaptation of enzymes
D Madern et al.
EXTREMOPHILES (2000)
The COG database: a tool for genome-scale analysis of protein functions and evolution
RL Tatusov et al.
NUCLEIC ACIDS RESEARCH (2000)