Related references
Note: Only part of the references are listed.Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for IncRNAs
Hagen Tilgner et al.
GENOME RESEARCH (2012)
Long noncoding RNAs are rarely translated in two human cell lines
Balazs Banfai et al.
GENOME RESEARCH (2012)
BRAFV600E remodels the melanocyte transcriptome and induces BANCR to regulate melanoma cell migration
Ross J. Flockhart et al.
GENOME RESEARCH (2012)
The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
Thomas Derrien et al.
GENOME RESEARCH (2012)
GENCODE: The reference human genome annotation for The ENCODE Project
Jennifer Harrow et al.
GENOME RESEARCH (2012)
Landscape of transcription in human cells
Sarah Djebali et al.
NATURE (2012)
An integrated encyclopedia of DNA elements in the human genome
Ian Dunham et al.
NATURE (2012)
Targeted RNA sequencing reveals the deep complexity of the human transcriptome
Tim R. Mercer et al.
NATURE BIOTECHNOLOGY (2012)
Genome-wide analysis reveals distinct patterns of epigenetic features in long non-coding RNA loci
Satish Sati et al.
NUCLEIC ACIDS RESEARCH (2012)
The polymorphism rs944289 predisposes to papillary thyroid carcinoma through a large intergenic noncoding RNA gene of tumor suppressor type
Jaroslaw Jendrzejewski et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Dark Matter RNA: Existence, Function, and Controversy
Philipp Kapranov et al.
Frontiers in Genetics (2012)
The uniqueome: a mappability resource for short-tag sequencing
Ryan Koehler et al.
BIOINFORMATICS (2011)
PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions
Michael F. Lin et al.
BIOINFORMATICS (2011)
Human polymorphisms at long non-coding RNAs (lncRNAs) and association with prostate cancer risk
Guangfu Jin et al.
CARCINOGENESIS (2011)
Conserved Function of lincRNAs in Vertebrate Embryonic Development despite Rapid Sequence Evolution
Igor Ulitsky et al.
CELL (2011)
Ribosome Profiling of Mouse Embryonic Stem Cells Reveals the Complexity and Dynamics of Mammalian Proteomes
Nicholas T. Ingolia et al.
CELL (2011)
Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
Moran N. Cabili et al.
GENES & DEVELOPMENT (2011)
Molecular Mechanisms of Long Noncoding RNAs
Kevin C. Wang et al.
MOLECULAR CELL (2011)
A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression
Kevin C. Wang et al.
NATURE (2011)
Response to The Reality of Pervasive Transcription
Harm van Bakel et al.
PLOS BIOLOGY (2011)
The Reality of Pervasive Transcription
Michael B. Clark et al.
PLOS BIOLOGY (2011)
Genomewide characterization of non-polyadenylated RNAs
Li Yang et al.
GENOME BIOLOGY (2011)
Long Noncoding RNAs with Enhancer-like Function in Human Cells
Ulf Andersson Orom et al.
CELL (2010)
Distinct Epigenomic Landscapes of Pluripotent and Lineage-Committed Human Cells
R. David Hawkins et al.
CELL STEM CELL (2010)
Mammalian microRNAs predominantly act to decrease target mRNA levels
Huili Guo et al.
NATURE (2010)
Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs
Mitchell Guttman et al.
NATURE BIOTECHNOLOGY (2010)
Most Dark Matter'' Transcripts Are Associated With Known Genes
Harm van Bakel et al.
PLOS BIOLOGY (2010)
Identification of intergenic trans-regulatory RNAs containing a disease-linked SNP sequence and targeting cell cycle progression/differentiation pathways in multiple common human disorders
Anna B. Glinskii et al.
CELL CYCLE (2009)
Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
Mitchell Guttman et al.
NATURE (2009)
Human DNA methylomes at base resolution show widespread epigenomic differences
Ryan Lister et al.
NATURE (2009)
Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression
Ahmad M. Khalil et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Potential etiologic and functional implications of genome-wide association loci for human diseases and traits
Lucia A. Hindorff et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
The Genetic Signatures of Noncoding RNAs
John S. Mattick
PLOS GENETICS (2009)
3′ End Processing of a Long Nuclear-Retained Noncoding RNA Yields a tRNA-like Cytoplasmic RNA
Jeremy E. Wilusz et al.
CELL (2008)
Mapping and quantifying mammalian transcriptomes by RNA-Seq
Ali Mortazavi et al.
NATURE METHODS (2008)
Differentiating Protein-Coding and Noncoding RNA: Challenges and Ambiguities
Marcel E. Dinger et al.
PLOS COMPUTATIONAL BIOLOGY (2008)
The expanding RNA polymerase III transcriptome
Giorgio Dieci et al.
TRENDS IN GENETICS (2007)
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Ewan Birney et al.
NATURE (2007)
RNA maps reveal new RNA classes and a possible function for pervasive transcription
Philipp Kapranov et al.
SCIENCE (2007)
Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs
Jasmina Ponjavic et al.
GENOME RESEARCH (2007)
A screen for nuclear transcripts identifies two linked noncoding RNAs associated with SC35 splicing domains
John N. Hutchinson et al.
BMC GENOMICS (2007)
Identification of a novel non-coding RNA, MIAT, that confers risk of myocardial infarction
Nobuaki Ishii et al.
JOURNAL OF HUMAN GENETICS (2006)
Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution
J Cheng et al.
SCIENCE (2005)
Global identification of human transcribed sequences with genome tiling arrays
P Bertone et al.
SCIENCE (2004)
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs
Y Okazaki et al.
NATURE (2002)
Large-scale transcriptional activity in chromosomes 21 and 22
P Kapranov et al.
SCIENCE (2002)