Related references
Note: Only part of the references are listed.Living Colors in the Gray Mold Pathogen Botrytis cinerea: Codon-Optimized Genes Encoding Green Fluorescent Protein and mCherry, Which Exhibit Bright Fluorescence
Michaela Leroch et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Botrytis cinerea BcNma is involved in apoptotic cell death but not in stress adaptation
Alin Finkelshtein et al.
FUNGAL GENETICS AND BIOLOGY (2011)
Co-evolutionary interactions between host resistance and pathogen effector genes in flax rust disease
Michael Ravensdale et al.
MOLECULAR PLANT PATHOLOGY (2011)
Flux of nitric oxide between the necrotrophic pathogen Botrytis cinerea and the host plant
Juan L. Turrion-Gomez et al.
MOLECULAR PLANT PATHOLOGY (2011)
The Botrytis cinerea phytotoxin botcinic acid requires two polyketide synthases for production and has a redundant role in virulence with botrydial
Berengere Dalmais et al.
MOLECULAR PLANT PATHOLOGY (2011)
Considering Transposable Element Diversification in De Novo Annotation Approaches
Timothee Flutre et al.
PLOS ONE (2011)
Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations
Thierry Rouxel et al.
NATURE COMMUNICATIONS (2011)
Anti-Apoptotic Machinery Protects the Necrotrophic Fungus Botrytis cinerea from Host-Induced Apoptotic-Like Cell Death during Plant Infection
Neta Shlezinger et al.
PLOS PATHOGENS (2011)
Tipping the Balance: Sclerotinia sclerotiorum Secreted Oxalic Acid Suppresses Host Defenses by Manipulating the Host Redox Environment
Brett Williams et al.
PLOS PATHOGENS (2011)
Apoptotic-like regulation of programmed cell death in plants
Theresa J. Reape et al.
APOPTOSIS (2010)
ANAIS: Analysis of NimbleGen Arrays Interface
Adeline Simon et al.
BIOINFORMATICS (2010)
Phylogenomics reveals subfamilies of fungal nonribosomal peptide synthetases and their evolutionary relationships
Kathryn E. Bushley et al.
BMC EVOLUTIONARY BIOLOGY (2010)
Phylogenetic analysis of fungal ABC transporters
Andriy Kovalchuk et al.
BMC GENOMICS (2010)
The Botrytis cinerea xylanase Xyn11A contributes to virulence with its necrotizing activity, not with its catalytic activity
Judith Noda et al.
BMC PLANT BIOLOGY (2010)
New developments in pathogenicity and virulence of necrotrophs
Richard P. Oliver et al.
CURRENT OPINION IN PLANT BIOLOGY (2010)
Sexual mating of Botrytis cinerea illustrates PRP8 intein HEG activity
Annika A. M. Bokor et al.
FUNGAL GENETICS AND BIOLOGY (2010)
The development-specific ssp1 and ssp2 genes of Sclerotinia sclerotiorum encode lectins with distinct yet compensatory regulation
Moyi Li et al.
FUNGAL GENETICS AND BIOLOGY (2010)
The Botrytis cinerea aspartic proteinase family
Arjen ten Have et al.
FUNGAL GENETICS AND BIOLOGY (2010)
The role of mitogen-activated protein (MAP) kinase signalling components and the Ste12 transcription factor in germination and pathogenicity of Botrytis cinerea
Astrid Schamber et al.
MOLECULAR PLANT PATHOLOGY (2010)
Perigord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis
Francis Martin et al.
NATURE (2010)
Host-selective toxins, Ptr ToxA and Ptr ToxB, as necrotrophic effectors in the Pyrenophora tritici-repentis-wheat interaction
Lynda M. Ciuffetti et al.
NEW PHYTOLOGIST (2010)
KEGG for representation and analysis of molecular networks involving diseases and drugs
Minoru Kanehisa et al.
NUCLEIC ACIDS RESEARCH (2010)
Translocation of Magnaporthe oryzae Effectors into Rice Cells and Their Subsequent Cell-to-Cell Movement
Chang Hyun Khang et al.
PLANT CELL (2010)
A unique wheat disease resistance-like gene governs effector-triggered susceptibility to necrotrophic pathogens
Justin D. Faris et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Pathogenicity Determinants in Smut Fungi Revealed by Genome Comparison
Jan Schirawski et al.
SCIENCE (2010)
Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism
Pietro D. Spanu et al.
SCIENCE (2010)
Secondary metabolic gene clusters: evolutionary toolkits for chemical innovation
Anne Osbourn
TRENDS IN GENETICS (2010)
A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres
Simon R. Ellwood et al.
GENOME BIOLOGY (2010)
A fungal phylogeny based on 82 complete genomes using the composition vector method
Hao Wang et al.
BMC EVOLUTIONARY BIOLOGY (2009)
Evolution of ribosomal DNA-derived satellite repeat in tomato genome
Sung-Hwan Jo et al.
BMC PLANT BIOLOGY (2009)
Diversity of sesquiterpene synthases in the basidiomycete Coprinus cinereus
Sean Agger et al.
MOLECULAR MICROBIOLOGY (2009)
Does Botrytis cinerea Ignore H2O2-Induced Oxidative Stress During Infection? Characterization of Botrytis Activator Protein 1
Nora Temme et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2009)
The development-specific protein (Ssp1) from Sclerotinia sclerotiorum is encoded by a novel gene expressed exclusively in sclerotium tissues
Moyi Li et al.
MYCOLOGIA (2009)
Under pressure: investigating the biology of plant infection by Magnaporthe oryzae
Richard A. Wilson et al.
NATURE REVIEWS MICROBIOLOGY (2009)
Dynamic carbon transfer during pathogenesis of sunflower by the necrotrophic fungus Botrytis cinerea: from plant hexoses to mannitol
Thierry Dulermo et al.
NEW PHYTOLOGIST (2009)
CDD: specific functional annotation with the Conserved Domain Database
Aron Marchler-Bauer et al.
NUCLEIC ACIDS RESEARCH (2009)
The ABC transporter BcatrB from Botrytis cinerea exports camalexin and is a virulence factor on Arabidopsis thaliana
Francesca L. Stefanato et al.
PLANT JOURNAL (2009)
Genome-wide functional analysis reveals that infection-associated fungal autophagy is necessary for rice blast disease
Michael J. Kershaw et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
The Ascomycota Tree of Life: A Phylum-wide Phylogeny Clarifies the Origin and Evolution of Fundamental Reproductive and Ecological Traits
Conrad L. Schoch et al.
SYSTEMATIC BIOLOGY (2009)
Efflux in Fungi: La Piece de Resistance
Jeffrey J. Coleman et al.
PLOS PATHOGENS (2009)
Fungicide-Driven Evolution and Molecular Basis of Multidrug Resistance in Field Populations of the Grey Mould Fungus Botrytis cinerea
Matthias Kretschmer et al.
PLOS PATHOGENS (2009)
Fungal apoptosis: function, genes and gene function
Amir Sharon et al.
FEMS MICROBIOLOGY REVIEWS (2009)
Sesquiterpene Synthase from the Botrydial Biosynthetic Gene Cluster of the Phytopathogen Botrytis cinerea
Cristina Pinedo et al.
ACS CHEMICAL BIOLOGY (2008)
The MEROPS batch BLAST:: A tool to detect peptidases and their non-peptidase homologues in a genome
Neil D. Rawlings et al.
BIOCHIMIE (2008)
Genome annotation in plants and fungi:: EuGene as a model platform
Sylvain Foissac et al.
CURRENT BIOINFORMATICS (2008)
Evolutionary biology: Genomic clues to original sex in fungi
Paul S. Dyer
CURRENT BIOLOGY (2008)
Secondary metabolism: regulation and role in fungal biology
Ellen M. Fox et al.
CURRENT OPINION IN MICROBIOLOGY (2008)
Transcription factors in fungi
Ekaterina Shelest
FEMS MICROBIOLOGY LETTERS (2008)
Comparative genomics of the oxidative phosphorylation system in fungi
Jose L. Lavin et al.
FUNGAL GENETICS AND BIOLOGY (2008)
The Gα subunit BCG1, the phospholipase C (BcPLC1) and the calcineurin phosphatase co-ordinately regulate gene expression in the grey mould fungus Botrytis cinerea
Julia Schumacher et al.
MOLECULAR MICROBIOLOGY (2008)
Plant programmed cell death: can't live with it; can't live without it
Brett Williams et al.
MOLECULAR PLANT PATHOLOGY (2008)
Oxalic acid is an elicitor of plant programmed cell death during Sclerotinia sclerotiorum disease development
Kyoung Su Kim et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2008)
NADPH Oxidases are involved in differentiation and pathogenicity in Botrytis cinerea
Nadia Segmueller et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2008)
The cAMP-Dependent Signaling Pathway and Its Role in Conidial Germination, Growth, and Virulence of the Gray Mold Botrytis cinerea
Julia Schumacher et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2008)
Identification of the sex genes in an early diverged fungus
Alexander Idnurm et al.
NATURE (2008)
Assessing the Performance of Single-Copy Genes for Recovering Robust Phylogenies
G. Aguileta et al.
SYSTEMATIC BIOLOGY (2008)
The genetic basis for indole-diterpene chemical diversity in filamentous fungi
Sanjay Saikia et al.
MYCOLOGICAL RESEARCH (2008)
Biosynthesis of secondary metabolites in the rice blast fungus Magnaporthe grisea:: the role of hybrid PKS-NRPS in pathogenicity
Jerome Collemare et al.
MYCOLOGICAL RESEARCH (2008)
Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus
Natalie D. Fedorova et al.
PLOS GENETICS (2008)
Sclerotial development in Sclerotinia sclerotiorum: awakening molecular analysis of a “Dormant” structure
A. Erental et al.
Fungal Biology Reviews (2008)
Botrytis cinerea virulence factors:: new insights into a necrotrophic and polyphageous pathogen
Mathias Choquer et al.
FEMS MICROBIOLOGY LETTERS (2007)
NADPH oxidases in fungi: Diverse roles of reactive oxygen species in fungal cellular differentiation
Daigo Takemoto et al.
FUNGAL GENETICS AND BIOLOGY (2007)
Dothideomycete-plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum
James K. Hane et al.
PLANT CELL (2007)
The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization
Christina A. Cuomo et al.
SCIENCE (2007)
Genomic and population analyses of the mating type loci in Coccidioides species reveal evidence for sexual reproduction and gene acquisition
M. Alejandra Mandel et al.
EUKARYOTIC CELL (2007)
Deletion of the adenylate cyclase (sac1) gene affects multiple developmental pathways and pathogenicity in Sclerotinia sclerotiorum
Wayne M. Jurick et al.
FUNGAL GENETICS AND BIOLOGY (2007)
Evolution of prokaryotic subtilases: Genome-wide analysis reveals novel subfamilies with different catalytic residues
Roland J. Siezen et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2007)
The external alternative NAD(P)H dehydrogenase NDE3 is localized both in the mitochondria and in the cytoplasm of Neurospora crassa
Patricia Carneiro et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
Evolution of the mating type locus:: Insights gained from the dimorphic primary fungal pathogens Histoplasma capsulatum, Coccidioides immitis, and Coccidioides posadasii
James A. Fraser et al.
EUKARYOTIC CELL (2007)
New populations of Sclerotinia sclerotiorum from lettuce in California and peas and lentils in Washington
Gabriela Malvarez et al.
PHYTOPATHOLOGY (2007)
Oxaloacetate hydrolase, the C-C bond lyase of oxalate secreting fungi
Ying Han et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
Fusicoccins are biosynthesized by an unusual chimera diterpene synthase in fungi
Tomonobu Toyomasu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Histochemical and genetic analysis of host and non-host interactions of Arabidopsis with three Botrytis species: an important role for cell death control
Peter van Baarlen et al.
MOLECULAR PLANT PATHOLOGY (2007)
Botrytis cinerea: the cause of grey mould disease
Brian Williamson et al.
MOLECULAR PLANT PATHOLOGY (2007)
The nuclear-encoded inteins of fungi
Russell T. M. Poulter et al.
FUNGAL GENETICS AND BIOLOGY (2007)
Toward a phylogenetic classification of the Leotiomycetes based on rDNA data
Zheng Wang et al.
MYCOLOGIA (2006)
A five-gene phylogeny of Pezizomycotina
Joseph W. Spatafora et al.
MYCOLOGIA (2006)
Identification of an abscisic acid gene cluster in the grey mold Botrytis cinerea
Verena Siewers et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Comparison of transcription of multiple genes at three developmental stages of the plant pathogen Sclerotinia sclerotiorum
AC Sexton et al.
FEMS MICROBIOLOGY LETTERS (2006)
Autophagic fungal cell death is necessary for infection by the rice blast fungus
C Veneault-Fourrey et al.
SCIENCE (2006)
Botcinins E and F and botcinolide from Botrytis cinerea and structural revision of botcinolides
H Tani et al.
JOURNAL OF NATURAL PRODUCTS (2006)
TCDB: the Transporter Classification Database for membrane transport protein analyses and information
Milton H. Saier et al.
NUCLEIC ACIDS RESEARCH (2006)
Sclerotinia sclerotiorum (Lib.) de Bary: biology and molecular traits of a cosmopolitan pathogen
MD Bolton et al.
MOLECULAR PLANT PATHOLOGY (2006)
Sequencing of Aspergillus nidulans and comparative analysis with A-fumigatus and A-oryzae
JE Galagan et al.
NATURE (2005)
Fungal secondary metabolism - From biochemistry to genomics
NP Keller et al.
NATURE REVIEWS MICROBIOLOGY (2005)
Lateral transfer of mating system in Stemphylium
P Inderbitzin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Evidence for sexuality in the opportunistic fungal pathogen Aspergillus fumigatus
M Paoletti et al.
CURRENT BIOLOGY (2005)
Combined evidence annotation of transposable elements in genome sequences
H Quesneville et al.
PLOS COMPUTATIONAL BIOLOGY (2005)
InterProScan: protein domains identifier
E Quevillon et al.
NUCLEIC ACIDS RESEARCH (2005)
SpliceMachine:: predicting splice sites from high-dimensional local context representations
S Degroeve et al.
BIOINFORMATICS (2005)
Ty1 copy number dynamics in Saccharomyces
DJ Garfinkel et al.
GENETICS (2005)
Reactive oxygen species and development in microbial eukaryotes
J Aguirre et al.
TRENDS IN MICROBIOLOGY (2005)
Expressed sequence tags from the phytopathogenic fungus Botrytis cinerea
M Viaud et al.
EUROPEAN JOURNAL OF PLANT PATHOLOGY (2005)
Molecular phylogeny of the plant pathogenic genus Botrytis and the evolution of host specificity
M Staats et al.
MOLECULAR BIOLOGY AND EVOLUTION (2005)
The molecular structure and catalytic mechanism of a novel carboxyl peptidase from Scytalidium lignicolum
M Fujinaga et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Lessons from the genome sequence of Neurospora crassa:: Tracing the path from genomic blueprint to multicellular organism
KA Borkovich et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2004)
The tetraspanin BcPls1 is required for appressorium-mediated penetration of Botrytis cinerea into host plant leaves
M Gourgues et al.
MOLECULAR MICROBIOLOGY (2004)
DAGchainer: a tool for mining segmental genome duplications and synteny
BJ Haas et al.
BIOINFORMATICS (2004)
Relationships among endo-polygalacturonase, oxalate, pH, and plant polygalacturonase-inhibiting protein (PGIP) in the interaction between Sclerotinia sclerotiorum and soybean
F Favaron et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2004)
Oxalate production by Sclerotinia sclerotiorum deregulates guard cells during infection
RL Guimaraes et al.
PLANT PHYSIOLOGY (2004)
Functional analysis of H2O2-generating systems in Botrytis cinerea: the major Cu-Zn-superoxide dismutase (BCSOD1) contributes to virulence on French bean, whereas a glucose oxidase (BCGOD1) is dispensable
Y Rolke et al.
MOLECULAR PLANT PATHOLOGY (2004)
Model selection and model averaging in phylogenetics: Advantages of akaike information criterion and Bayesian approaches over likelihood ratio tests
D Posada et al.
SYSTEMATIC BIOLOGY (2004)
Versatile and open software for comparing large genomes
S Kurtz et al.
GENOME BIOLOGY (2004)
Whole-genome analysis of two-component signal transduction genes in fungal pathogens
NL Catlett et al.
EUKARYOTIC CELL (2003)
The COG database: an updated version includes eukaryotes
RL Tatusov et al.
BMC BIOINFORMATICS (2003)
Detecting putative orthologs
DP Wall et al.
BIOINFORMATICS (2003)
The Sclerotinia sclerotiorum pac1 gene is required for sclerotial development and virulence
JA Rollins
MOLECULAR PLANT-MICROBE INTERACTIONS (2003)
OrthoMCL: Identification of ortholog groups for eukaryotic genomes
L Li et al.
GENOME RESEARCH (2003)
Whole-genome sequence assembly for mammalian genomes: Arachne 2
DB Jaffe et al.
GENOME RESEARCH (2003)
The adenylate cyclase (BAC) in Botrytis cinerea is required for full pathogenicity
A Klimpel et al.
MOLECULAR PLANT PATHOLOGY (2002)
Two novel fungal virulence genes specifically expressed in appressoria of the rice blast fungus
CY Xue et al.
PLANT CELL (2002)
The putative role of botrydial and related metabolites in the infection mechanism of Botrytis cinerea
AJ Colmenares et al.
JOURNAL OF CHEMICAL ECOLOGY (2002)
Computational and experimental analysis of microsatellites in rice (Oryza sativa L.):: Frequency, length variation, transposon associations, and genetic marker potential
S Temnykh et al.
GENOME RESEARCH (2001)
MRBAYES: Bayesian inference of phylogenetic trees
JP Huelsenbeck et al.
BIOINFORMATICS (2001)
Abrogation of disease development in plants expressing animal antiapoptotic genes
MB Dickman et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
A Krogh et al.
JOURNAL OF MOLECULAR BIOLOGY (2001)
PH signaling in Sclerotinia sclerotiorum: Identification of a pacC/RIM1 Homolog
JA Rollins et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2001)
Oxalic acid, a pathogenicity factor for Sclerotinia sclerotiorum, suppresses the oxidative burst of the host plant
SG Cessna et al.
PLANT CELL (2000)