Related references
Note: Only part of the references are listed.MicroRNA transfection and AGO-bound CLIP-seq data sets reveal distinct determinants of miRNA action
Jiayu Wen et al.
RNA (2011)
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
Mark D. Robinson et al.
BIOINFORMATICS (2010)
A two-step site and mRNA-level model for predicting microRNA targets
Takaya Saito et al.
BMC BIOINFORMATICS (2010)
Epigenetic Regulation of miR-184 by MBD1 Governs Neural Stem Cell Proliferation and Differentiation
Changmei Liu et al.
CELL STEM CELL (2010)
PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium
Huaiyu Mi et al.
NUCLEIC ACIDS RESEARCH (2010)
The UCSC Genome Browser database: update 2010
Brooke Rhead et al.
NUCLEIC ACIDS RESEARCH (2010)
A Draft Sequence of the Neandertal Genome
Richard E. Green et al.
SCIENCE (2010)
Comprehensive modeling of microRNA targets predicts functional non-conserved and non-canonical sites
Doron Betel et al.
GENOME BIOLOGY (2010)
DIANA-mirPath: Integrating human and mouse microRNAs in pathways
G. L. Papadopoulos et al.
BIOINFORMATICS (2009)
TargetMiner: microRNA target prediction with systematic identification of tissue-specific negative examples
Sanghamitra Bandyopadhyay et al.
BIOINFORMATICS (2009)
CORNA: testing gene lists for regulation by microRNAs
X. Wu et al.
BIOINFORMATICS (2009)
SOAP2: an improved ultrafast tool for short read alignment
Ruiqiang Li et al.
BIOINFORMATICS (2009)
Accurate microRNA target prediction correlates with protein repression levels
Manolis Maragkakis et al.
BMC BIOINFORMATICS (2009)
Sequence features associated with microRNA strand selection in humans and flies
Hai Yang Hu et al.
BMC GENOMICS (2009)
Estimating accuracy of RNA-Seq and microarrays with proteomics
Xing Fu et al.
BMC GENOMICS (2009)
Most mammalian mRNAs are conserved targets of microRNAs
Robin C. Friedman et al.
GENOME RESEARCH (2009)
Unlocking the secrets of the genome
Susan E. Celniker et al.
NATURE (2009)
Many roads to maturity: microRNA biogenesis pathways and their regulation
Julia Winter et al.
NATURE CELL BIOLOGY (2009)
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Da Wei Huang et al.
NATURE PROTOCOLS (2009)
Combinatorial network of primary and secondary microRNA-driven regulatory mechanisms
Kang Tu et al.
NUCLEIC ACIDS RESEARCH (2009)
High-resolution profiling and discovery of planarian small RNAs
Marc R. Friedlaender et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Differences in human and chimpanzee gene expression patterns define an evolving network of transcription factors in brain
Katja Nowick et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Ben Langmead et al.
GENOME BIOLOGY (2009)
Epigenetic silencing of microRNA-34b/c and B-cell translocation gene 4 is associated with CpG island methylation in colorectal cancer
Minoru Toyota et al.
CANCER RESEARCH (2008)
A rapid method combining Golgi and Nissl staining to study neuronal morphology and cytoarchitecture
Nadia Pilati et al.
JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY (2008)
The impact of microRNAs on protein output
Daehyun Baek et al.
NATURE (2008)
A microRNA DNA methylation signature for human cancer metastasis
Amaia Lujambio et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
MicroRNA-373 induces expression of genes with complementary promoter sequences
Robert F. Place et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Prediction of both conserved and nonconserved microRNA targets in animals
Xiaowei Wang et al.
BIOINFORMATICS (2008)
miRBase: tools for microRNA genomics
Sam Griffiths-Jones et al.
NUCLEIC ACIDS RESEARCH (2008)
Switching from repression to activation: MicroRNAs can up-regulate translation
Shobha Vasudevan et al.
SCIENCE (2007)
Using expression profiling data to identify human microRNA targets
Jim C. Huang et al.
NATURE METHODS (2007)
Clustal W and clustal X version 2.0
M. A. Larkin et al.
BIOINFORMATICS (2007)
The role of site accessibility in microRNA target recognition
Michael Kertesz et al.
NATURE GENETICS (2007)
MicroRNA targeting specificity in mammals: Determinants beyond seed pairing
Andrew Grimson et al.
MOLECULAR CELL (2007)
Mechanisms of microRNA-mediated gene regulation in animal cells
Timothy W. Nilsen
TRENDS IN GENETICS (2007)
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
Nathaniel D. Heintzman et al.
NATURE GENETICS (2007)
Discovery of tissue-specific exons using comprehensive human exon microarrays
Tyson A. Clark et al.
GENOME BIOLOGY (2007)
Detection of microRNAs in frozen tissue sections by fluorescence in situ hybridization using locked nucleic acid probes and tyramide signal amplification
Asli N. Silahtaroglu et al.
NATURE PROTOCOLS (2007)
A developmental view of microRNA function
Yong Zhao et al.
TRENDS IN BIOCHEMICAL SCIENCES (2007)
Plasticity in the human central nervous system
S. F. Cooke et al.
BRAIN (2006)
Expression profiling in primates reveals a rapid evolution of human transcription factors
Y Gilad et al.
NATURE (2006)
miRBase: microRNA sequences, targets and gene nomenclature
Sam Griffiths-Jones et al.
NUCLEIC ACIDS RESEARCH (2006)
Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS)
GE Crawford et al.
GENOME RESEARCH (2006)
Evolution of primate gene expression
Philipp Khaitovich et al.
NATURE REVIEWS GENETICS (2006)
Combinatorial microRNA target predictions
A Krek et al.
NATURE GENETICS (2005)
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
BP Lewis et al.
CELL (2005)
MicroRNAs: Genomics, biogenesis, mechanism, and function
DP Bartel
CELL (2004)
Regional patterns of gene expression in human and chimpanzee brains
P Khaitovich et al.
GENOME RESEARCH (2004)
Micrornas: Small RNAs with a big role in gene regulation
L He et al.
NATURE REVIEWS GENETICS (2004)
The microRNA Registry
S Griffiths-Jones
NUCLEIC ACIDS RESEARCH (2004)
Prediction of mammalian microRNA targets
BP Lewis et al.
CELL (2003)
Elevated gene expression levels distinguish human from non-human primate brains
M Cáceres et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
MicroRNA pathways in flies and worms: Growth, death, fat, stress, and timing
V Ambros
CELL (2003)
Human prefrontal cortex: Processing and representational perspectives
JN Wood et al.
NATURE REVIEWS NEUROSCIENCE (2003)
Intra- and interspecific variation in primate gene expression patterns
W Enard et al.
SCIENCE (2002)
Cytokine responses to LTP induction in the rat hippocampus: A comparison of in vitro and in vivo techniques
JL Jankowsky et al.
LEARNING & MEMORY (2000)