4.6 Article

Dynamics of Genome Rearrangement in Bacterial Populations

Related references

Note: Only part of the references are listed.
Article Biochemical Research Methods

Dependence of paracentric inversion rate on tract length

Thomas L. York et al.

BMC BIOINFORMATICS (2007)

Article Biochemistry & Molecular Biology

Mutational bias suggests that replication termination occurs near the dif site, not at Ter sites

Heather Hendrickson et al.

MOLECULAR MICROBIOLOGY (2007)

Article Multidisciplinary Sciences

Microinversions in mammalian evolution

M. J. Chaisson et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Biochemistry & Molecular Biology

A molecular mousetrap determines polarity of termination of DNA replication in E-coli

Mark D. Mulcair et al.

Article Biochemistry & Molecular Biology

Selection for chromosome architecture in bacteria

Heather Hendrickson et al.

JOURNAL OF MOLECULAR EVOLUTION (2006)

Review Multidisciplinary Sciences

The nature and dynamics of bacterial genomes

H Ochman et al.

SCIENCE (2006)

Article Microbiology

Origin of replication in circular prokaryotic chromosomes

P Worning et al.

ENVIRONMENTAL MICROBIOLOGY (2006)

Article Biochemistry & Molecular Biology

Application of phylogenetic networks in evolutionary studies

DH Huson et al.

MOLECULAR BIOLOGY AND EVOLUTION (2006)

Article Biochemistry & Molecular Biology

KOPS:: DNA motifs that control E-coli chromosome segregation by orienting the FtsK translocase

S Bigot et al.

EMBO JOURNAL (2005)

Article Multidisciplinary Sciences

Highways of gene sharing in prokaryotes

RG Beiko et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Biochemical Research Methods

Efficient sorting of genomic permutations by translocation, inversion and block interchange

S Yancopoulos et al.

BIOINFORMATICS (2005)

Article Multidisciplinary Sciences

Global divergence of microbial genome sequences mediated by propagating fronts

K Vetsigian et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Multidisciplinary Sciences

Extensive DNA inversions in the B. fragilis genome control variable gene expression

AM Cerdeño-Tárraga et al.

SCIENCE (2005)

Article Biochemistry & Molecular Biology

A Bayesian analysis of metazoan mitochondrial genome arrangements

B Larget et al.

MOLECULAR BIOLOGY AND EVOLUTION (2005)

Article Multidisciplinary Sciences

Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis

PSG Chain et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

Article Multidisciplinary Sciences

Microevolution and history of the plague bacillus, Yersinia pestis

M Achtman et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

Article Biochemistry & Molecular Biology

Mauve: Multiple alignment of conserved genomic sequence with rearrangements

ACE Darling et al.

GENOME RESEARCH (2004)

Article Microbiology

Single-molecule approach to bacterial genomic comparisons via optical mapping

S Zhou et al.

JOURNAL OF BACTERIOLOGY (2004)

Review Microbiology

The replication-related organization of bacterial genomes

EPC Rocha

MICROBIOLOGY-SGM (2004)

Article Biochemistry & Molecular Biology

Ψ-Φ:: Exploring the outer limits of bacterial pseudogenes

E Lerat et al.

GENOME RESEARCH (2004)

Article Biochemical Research Methods

MCMC genome rearrangement

Istvan Miklos

BIOINFORMATICS (2003)

Article Biochemical Research Methods

Scaling up accurate phylogenetic reconstruction from gene-order data

Jijun Tang et al.

BIOINFORMATICS (2003)

Article Multidisciplinary Sciences

Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution

P Pevzner et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)

Review Genetics & Heredity

Molecular evolution meets the genomics revolution

KH Wolfe et al.

NATURE GENETICS (2003)

Article Genetics & Heredity

DNA repeats lead to the accelerated loss of gene order in bacteria

EPC Rocha

TRENDS IN GENETICS (2003)

Article Biotechnology & Applied Microbiology

A whole-genome shotgun optical map of Yersinia pestis strain KIM

SG Zhou et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2002)

Article Microbiology

Genome sequence of Yersinia pestis KIM

W Deng et al.

JOURNAL OF BACTERIOLOGY (2002)

Article Ecology

Gene transfer in bacteria: Speciation without species?

JG Lawrence

THEORETICAL POPULATION BIOLOGY (2002)

Article Multidisciplinary Sciences

Genome sequence of Yersinia pestis, the causative agent of plague

J Parkhill et al.

NATURE (2001)

Article Genetics & Heredity

Evolution of prokaryotic gene order: genome rearrangements in closely related species

M Suyama et al.

TRENDS IN GENETICS (2001)

Review Ecology

Rave genomic changes as a tool for phylogenetics

A Rokas et al.

TRENDS IN ECOLOGY & EVOLUTION (2000)

Article Genetics & Heredity

Genome rearrangement by replication-directed translocation

ERM Tillier et al.

NATURE GENETICS (2000)