4.6 Article

Diverse Splicing Patterns of Exonized Alu Elements in Human Tissues

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Alternative splicing of Alu exons -: two arms are better than one

Nurit Gal-Mark et al.

NUCLEIC ACIDS RESEARCH (2008)

Article Biochemistry & Molecular Biology

The UCSC Genome Browser Database: 2008 update

D. Karolchik et al.

NUCLEIC ACIDS RESEARCH (2008)

Article Biochemistry & Molecular Biology

A regulator of Dscam mutually exclusive splicing fidelity

Sara Olson et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2007)

Article Cell Biology

Global analysis of alternative splicing differences between humans and chimpanzees

John A. Calarco et al.

GENES & DEVELOPMENT (2007)

Article Multidisciplinary Sciences

A second generation human haplotype map of over 3.1 million SNPs

Kelly A. Frazer et al.

NATURE (2007)

Review Biochemistry & Molecular Biology

The necessary junk: new functions for transposable elements

Alysson R. Muotri et al.

HUMAN MOLECULAR GENETICS (2007)

Review Biochemistry & Molecular Biology

The birth of new exons: Mechanisms and evolutionary consequences

Rotem Sorek

Article Biochemistry & Molecular Biology

Heritability of alternative splicing in the human genome

Tony Kwan et al.

GENOME RESEARCH (2007)

Article Biochemistry & Molecular Biology

Global analysis of exon creation versus loss and the role of alternative splicing in 17 vertebrate genomes

Alexander V. Alekseyenko et al.

Article Biochemistry & Molecular Biology

Depolarization and CaM kinase IV modulate NMDA receptor splicing through two essential RNA elements

Ji-Ann Lee et al.

PLOS BIOLOGY (2007)

Article Biotechnology & Applied Microbiology

Exon arrays provide accurate assessments of gene expression

Karen Kapur et al.

GENOME BIOLOGY (2007)

Article Biotechnology & Applied Microbiology

Discovery of tissue-specific exons using comprehensive human exon microarrays

Tyson A. Clark et al.

GENOME BIOLOGY (2007)

Article Biochemistry & Molecular Biology

The ASAP II database: analysis and comparative genomics of alternative splicing in 15 animal species

Namshin Kim et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biochemistry & Molecular Biology

The UCSC Genome Browser Database: Update 2007

R. M. Kuhn et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biotechnology & Applied Microbiology

Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array

Paul J. Gardina et al.

BMC GENOMICS (2006)

Article Multidisciplinary Sciences

Probe Selection and Expression Index Computation of Affymetrix Exon Arrays

Yi Xing et al.

PLOS ONE (2006)

Article Biochemical Research Methods

TimeTree: a public knowledge-base of divergence times among organisms

S. Blair Hedges et al.

BIOINFORMATICS (2006)

Article Biochemistry & Molecular Biology

Alu elements as regulators of gene expression

Julien Haesler et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Multidisciplinary Sciences

Comparison of multiple vertebrate genomes reveals the birth and evolution of human exons

Xiang H. -F. Zhang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Multidisciplinary Sciences

Model-based analysis of tiling-arrays for ChIP-chip

W. Evan Johnson et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Review Genetics & Heredity

Genomic insights into positive selection

Shameek Biswas et al.

TRENDS IN GENETICS (2006)

Article Biochemistry & Molecular Biology

Genomic signatures of positive selection in humans and the limits of outlier approaches

Joanna L. Kelley et al.

GENOME RESEARCH (2006)

Review Biochemistry & Molecular Biology

Alternative splicing: New insights from global analyses

Benjamin J. Blencowe

Review Multidisciplinary Sciences

Positive natural selection in the human lineage

P. C. Sabeti et al.

SCIENCE (2006)

Correction Biochemistry & Molecular Biology

A map of recent positive selection in the human genome (vol 4, pg 154, 2006)

BF Voight et al.

PLOS BIOLOGY (2006)

Article Biochemistry & Molecular Biology

A map of recent positive selection in the human genome

BF Voight et al.

PLOS BIOLOGY (2006)

Article Multidisciplinary Sciences

Global landscape of recent inferred Darwinian selection for Homo sapiens

ET Wang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Biochemistry & Molecular Biology

Ascertainment bias in studies of human genome-wide polymorphism

AG Clark et al.

GENOME RESEARCH (2005)

Article Biochemistry & Molecular Biology

Genomic regions exhibiting positive selection identified from dense genotype data

CS Carlson et al.

GENOME RESEARCH (2005)

Review Multidisciplinary Sciences

A haplotype map of the human genome

D Altshuler et al.

NATURE (2005)

Article Biochemistry & Molecular Biology

Alu-SINE exonization: En route to protein-coding function

M Krull et al.

MOLECULAR BIOLOGY AND EVOLUTION (2005)

Article Biochemical Research Methods

Multiple-laboratory comparison of microarray platforms

RA Irizarry et al.

NATURE METHODS (2005)

Article Biochemistry & Molecular Biology

Single nucleotide polymorphism-based validation of exonic splicing enhancers

WG Fairbrother et al.

PLOS BIOLOGY (2004)

Article Biochemistry & Molecular Biology

From junk to gene:: Curriculum vitae of a primate receptor isoform gene

SS Singer et al.

JOURNAL OF MOLECULAR BIOLOGY (2004)

Article Biochemistry & Molecular Biology

Whole-genome analysis of Alu repeat elements reveals complex evolutionary history

AL Price et al.

GENOME RESEARCH (2004)

Article Multidisciplinary Sciences

The International HapMap Project

RA Gibbs et al.

NATURE (2003)

Article Multidisciplinary Sciences

The birth of an alternatively spliced exon:: 3′ splice-site selection in Alu exons

G Lev-Maor et al.

SCIENCE (2003)

Article Biochemistry & Molecular Biology

Selenoprotein N: an endoplasmic reticulum glycoprotein with an early developmental expression pattern

N Petit et al.

HUMAN MOLECULAR GENETICS (2003)

Article Biochemistry & Molecular Biology

Interrogating a high-density SNP map for signatures of natural selection

JM Akey et al.

GENOME RESEARCH (2002)

Article Multidisciplinary Sciences

Predictive identification of exonic splicing enhancers in human genes

WG Fairbrother et al.

SCIENCE (2002)

Article Biochemistry & Molecular Biology

Alu-containing exons are alternatively spliced

R Sorek et al.

GENOME RESEARCH (2002)

Article Endocrinology & Metabolism

Alu elements in human growth hormone receptor gene 5′ untranslated region exons

CG Goodyer et al.

JOURNAL OF MOLECULAR ENDOCRINOLOGY (2001)

Article Cell Biology

Adaptive hitchhiking effects on genome variability

P Andolfatto

CURRENT OPINION IN GENETICS & DEVELOPMENT (2001)

Article Biochemistry & Molecular Biology

A new mathematical model for relative quantification in real-time RT-PCR

MW Pfaffl

NUCLEIC ACIDS RESEARCH (2001)

Review Multidisciplinary Sciences

Initial sequencing and analysis of the human genome

ES Lander et al.

NATURE (2001)

Review Genetics & Heredity

Adjusting the focus on human variation

M Przeworski et al.

TRENDS IN GENETICS (2000)