4.6 Article

A Mathematical Framework for the Selection of an Optimal Set of Peptides for Epitope-Based Vaccines

Related references

Note: Only part of the references are listed.
Article Computer Science, Software Engineering

SCIP: solving constraint integer programs

Tobias Achterberg

MATHEMATICAL PROGRAMMING COMPUTATION (2009)

Article Oncology

A multipeptide vaccine is safe and elicits T-cell responses in participants with advanced stage ovarian cancer

Kimberly A. Chianese-Bullock et al.

JOURNAL OF IMMUNOTHERAPY (2008)

Review Immunology

T-cell quality in memory and protection: implications for vaccine design

Robert A. Seder et al.

NATURE REVIEWS IMMUNOLOGY (2008)

Article Biochemical Research Methods

Prediction of MHC class II binding affinity using SMM-align, a novel stabilization matrix alignment method

Morten Nielsen et al.

BMC BIOINFORMATICS (2007)

Review Biotechnology & Applied Microbiology

More than one reason to rethink the use of peptides in vaccine design

Anthony W. Purcell et al.

NATURE REVIEWS DRUG DISCOVERY (2007)

Article Biochemical Research Methods

Coping with viral diversity in HIV vaccine design

David C. Nickle et al.

PLOS COMPUTATIONAL BIOLOGY (2007)

Article Biochemistry & Molecular Biology

Virus-epitope vaccine design: Informatic matching the HLA-I polymorphism to the virus genome

Tal Vider-Shalit et al.

MOLECULAR IMMUNOLOGY (2007)

Article Biochemistry & Molecular Biology

Polyvalent vaccines for optimal coverage of potential T-cell epitopes in global HIV-1 variants

Will Fischer et al.

NATURE MEDICINE (2007)

Article Biochemistry & Molecular Biology

SVMHC:: a server for prediction of MHC-binding peptides

Pierre Donnes et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Biochemical Research Methods

A community resource benchmarking predictions of peptide binding to MHC-I molecules

Bjoern Peters et al.

PLOS COMPUTATIONAL BIOLOGY (2006)

Article Immunology

Immunogenicity of a hepatitis B DNA vaccine administered to chronic HBV carriers

Maryline Mancini-Bourgine et al.

VACCINE (2006)

Article Biochemistry & Molecular Biology

Integrated modeling of the major events in the MHC class I antigen processing pathway

P Dönnes et al.

PROTEIN SCIENCE (2005)

Article Biochemical Research Methods

Solving and analyzing side-chain positioning problems using linear and integer programming

CL Kingsford et al.

BIOINFORMATICS (2005)

Article Biochemical Research Methods

The Los Alamos hepatitis C sequence database

C Kuiken et al.

BIOINFORMATICS (2005)

Article Biochemistry & Molecular Biology

MUSCLE: multiple sequence alignment with high accuracy and high throughput

RC Edgar

NUCLEIC ACIDS RESEARCH (2004)

Article Biochemical Research Methods

Improved prediction of MHC class I and class II epitopes using a novel Gibbs sampling approach

M Nielsen et al.

BIOINFORMATICS (2004)

Article Biochemistry & Molecular Biology

Reliable prediction of T-cell epitopes using neural networks with novel sequence representations

M Nielsen et al.

PROTEIN SCIENCE (2003)