3.9 Article

Genome sequence of Ensifer sp TW10; a Tephrosia wallichii (Biyani) microsymbiont native to the Indian Thar Desert

Journal

STANDARDS IN GENOMIC SCIENCES
Volume 9, Issue 2, Pages 304-314

Publisher

BMC
DOI: 10.4056/sigs.4598281

Keywords

root-nodule bacteria; nitrogen fixation; rhizobia; Alphaproteobacteria

Funding

  1. US Department of Energy's Office of Science, Biological and Environmental Research Program
  2. University of California, Lawrence Berkeley National Laboratory [DE-AC02-05CH11231]
  3. Lawrence Livermore National Laboratory [DE-AC52-07NA27344]
  4. Los Alamos National Laboratory [DE-AC02-06NA25396]
  5. Murdoch University Strategic Research Fund through the Crop and Plant Research Institute (CaPRI)
  6. GRDC National Rhizobium Program [UMU00032]
  7. Council of Scientific and Industrial Research (CSIR)
  8. Department of Biotechnology (India) [BT/PR11461/AGR/21/270/2008]
  9. Commonwealth of Australia

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Ensifer sp. TW10 is a novel N-2-fixing bacterium isolated from a root nodule of the perennial legume Tephrosia wallichii Graham (known locally as Biyani) found in the Great Indian (or Thar) desert, a large arid region in the northwestern part of the Indian subcontinent. Strain TW10 is a Gram-negative, rod shaped, aerobic, motile, non-spore forming, species of root nodule bacteria (RNB) that promiscuously nodulates legumes in Thar Desert alkaline soil. It is fast growing, acid-producing, and tolerates up to 2% NaCl and capable of growth at 40C. In this report we describe for the first time the primary features of this Thar Desert soil saprophyte together with genome sequence information and annotation. The 6,802,256 bp genome has a GC content of 62% and is arranged into 57 scaffolds containing 6,470 protein-coding genes, 73 RNA genes and a single rRNA operon. This genome is one of 100 RNB genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project.

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