Related references
Note: Only part of the references are listed.Molecular simulation and modeling of complex I
Gerhard Hummer et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2016)
Energy conversion, redox catalysis and generation of reactive oxygen species by respiratory complex I
Judy Hirst et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2016)
Roles of subunit NuoL in the proton pumping coupling mechanism of NADH: ubiquinone oxidoreductase (complex I) from Escherichia coli
Madhavan Narayanan et al.
JOURNAL OF BIOCHEMISTRY (2016)
Loss of Complex I activity in the Escherichia coli enzyme results from truncating the C-terminus of subunit K, but not from cross-linking it to subunits N or L
Shaotong Zhu et al.
JOURNAL OF BIOENERGETICS AND BIOMEMBRANES (2016)
Structure of mammalian respiratory complex I
Jiapeng Zhu et al.
NATURE (2016)
Atomic structure of the entire mammalian mitochondrial complex I
Karol Fiedorczuk et al.
NATURE (2016)
Electron Tunneling Rates in Respiratory Complex I Are Tuned for Efficient Energy Conversion
Simon de Vries et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2015)
New Perspectives on Proton Pumping in Cellular Respiration
Marten Wikstrom et al.
CHEMICAL REVIEWS (2015)
A giant molecular proton pump: structure and mechanism of respiratory complex I
Leonid A. Sazanov
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2015)
Redox-induced activation of the proton pump in the respiratory complex I
Vivek Sharma et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Mechanistic insight from the crystal structure of mitochondrial complex I
Volker Zickermann et al.
SCIENCE (2015)
The mechanism of proton translocation in respiratory complex I from molecular dynamics
Pengli Tan et al.
JOURNAL OF RECEPTORS AND SIGNAL TRANSDUCTION (2015)
Essential regions in the membrane domain of bacterial complex I (NDH-1): the machinery for proton translocation
Motoaki Sato et al.
JOURNAL OF BIOENERGETICS AND BIOMEMBRANES (2014)
On the mechanism of respiratory complex I
Thorsten Friedrich
JOURNAL OF BIOENERGETICS AND BIOMEMBRANES (2014)
Electrostatics, hydration, and proton transfer dynamics in the membrane domain of respiratory complex I
Ville R. I. Kaila et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Robust and accurate prediction of residue-residue interactions across protein interfaces using evolutionary information
Sergey Ovchinnikov et al.
ELIFE (2014)
Key role of water in proton transfer at the Qo-site of the cytochrome bc1 complex predicted by atomistic molecular dynamics simulations
Pekka A. Postila et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2013)
Energy-converting respiratory Complex I: On the way to the molecular mechanism of the proton pump
Marina Verkhovskaya et al.
INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY (2013)
NDUFAF7 Methylates Arginine 85 in the NDUFS2 Subunit of Human Complex I
Virginie F. Rhein et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2013)
Crystal structure of the entire respiratory complex I
Rozbeh Baradaran et al.
NATURE (2013)
LHON/MELAS overlap mutation in ND1 subunit of mitochondrial complex I affects ubiquinone binding as revealed by modeling in Escherichia coli NDH-1
Jukka Patsi et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2012)
Tracing the tail of ubiquinone in mitochondrial complex I
Heike Angerer et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2012)
EPR detection of two protein-associated ubiquinone components (SQNf and SQNs) in the membrane in situ and in proteoliposomes of isolated bovine heart complex I
Tomoko Ohnishi et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2012)
Stoichiometry of proton translocation by respiratory complex I and its mechanistic implications
Marten Wikstrom et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Exploring Interactions between the 49 kDa and ND1 Subunits in Mitochondrial NADH-Ubiquinone Oxidoreductase (Complex I) by Photoaffinity Labeling
Masatoshi Murai et al.
BIOCHEMISTRY (2011)
A two-state stabilization-change mechanism for proton-pumping complex I
Ulrich Brandt
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2011)
Improved Treatment of Ligands and Coupling Effects in Empirical Calculation and Rationalization of pKa Values
Chresten R. Sondergaard et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2011)
PROPKA3: Consistent Treatment of Internal and Surface Residues in Empirical pKa Predictions
Mats H. M. Olsson et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2011)
Structure of the membrane domain of respiratory complex I
Rouslan G. Efremov et al.
NATURE (2011)
Mutagenesis of the L, M, and N Subunits of Complex I from Escherichia coli Indicates a Common Role in Function
Jose Michel et al.
PLOS ONE (2011)
The Membrane Subunit NuoL(ND5) Is Involved in the Indirect Proton Pumping Mechanism of Escherichia coli Complex I
Eiko Nakamaru-Ogiso et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types
Jeffery B. Klauda et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2010)
The architecture of respiratory complex I
Rouslan G. Efremov et al.
NATURE (2010)
Functional Modules and Structural Basis of Conformational Coupling in Mitochondrial Complex I
Carola Hunte et al.
SCIENCE (2010)
Critical Roles of Subunit NuoH (ND1) in the Assembly of Peripheral Subunits with the Membrane Domain of Escherichia coli NDH-1
Prem Kumar Sinha et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2009)
Density Functional Theory Calculation of Bonding and Charge Parameters for Molecular Dynamics Studies on [FeFe] Hydrogenases
Christopher H. Chang et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2009)
Electrostatic interactions between FeS clusters in NADH:Ubiquinone oxidoreductase (complex I) from Escherichia coli
Liliya Euro et al.
BIOCHEMISTRY (2008)
Real-time electron transfer in respiratory complex I
Marina L. Verkhovskaya et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Glutamic acid 242 is a valve in the proton pump of cytochrome c oxidase
Ville R. I. Kaila et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Exploring the ubiquinone binding cavity of respiratory complex I
Maja A. Tocilescu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
The proton pumping stoichiometry of purified mitochondrial complex I reconstituted into proteoliposomes
Alexander Galkin et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2006)
Dynamic switching mechanisms in LOV1 and LOV2 domains of plant phototropins
Peter L. Freddolino et al.
BIOPHYSICAL JOURNAL (2006)
Electron tunneling chains of mitochondria
Christopher C. Moser et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2006)
The MELAS mutations 3946 and 3949 perturb the critical structure in a conserved loop of the ND1 subunit of mitochondrial complex I
Marko Kervinen et al.
HUMAN MOLECULAR GENETICS (2006)
Sequence analysis of the cbb3 oxidases and an atomic model for the Rhodobacter sphaeroides enzyme
Vivek Sharma et al.
BIOCHEMISTRY (2006)
Scalable molecular dynamics with NAMD
JC Phillips et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2005)
Helix switching of a key active-site residue in the cytochrome cbb3 oxidases
J Hemp et al.
BIOCHEMISTRY (2005)
Characterization of the membrane domain subunit NuoK (ND4L) of the NADH-quinone oxidoreductase from Escherichia coli
MC Kao et al.
BIOCHEMISTRY (2005)
A pair of membrane-embedded acidic residues in the NuoK subunit of Escherichia coli NDH-1, a counterpart of the ND4L subunit of the mitochondrial complex I, are required for high ubiquinone reductase activity
M Kervinen et al.
BIOCHEMISTRY (2004)
Functional roles of four conserved charged residues in the membrane domain subunit NuoA of the proton-translocating NADH-quinone oxidoreductase from Escherichia coli
MC Kao et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Transmembrane topology of the NuoL, M and N subunits of NADH:quinone oxidoreductase and their homologues among membrane-bound hydrogenases and bona fide antiporters
C Mathiesen et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2002)
ATP synthase - A marvellous rotary engine of the cell
M Yoshida et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2001)
Evidence for a quinone binding site close to the interface between NUOD and NUOB subunits of Complex I
I Prieur et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2001)
The deacylation step of acetylcholinesterase:: Computer simulation studies
P Vagedes et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2000)
Mutagenesis of three conserved Glu residues in a bacterial homologue of the ND1 subunit of complex I affects ubiquinone reduction kinetics but not inhibition by dicyclohexylcarbodiimide
S Kurki et al.
BIOCHEMISTRY (2000)