Related references
Note: Only part of the references are listed.$1 DNA barcodes for reconstructing complex phenomes and finding rare species in specimen-rich samples
Rudolf Meier et al.
CLADISTICS (2016)
Large-Scale Monitoring of Plants through Environmental DNA Metabarcoding of Soil: Recovery, Resolution, and Annotation of Four DNA Markers
Nicole A. Fahner et al.
PLOS ONE (2016)
Metagenome Skimming of Insect Specimen Pools: Potential for Comparative Genomics
Benjamin Linard et al.
GENOME BIOLOGY AND EVOLUTION (2015)
Quantitative evolutionary dynamics using high-resolution lineage tracking
Sasha F. Levy et al.
NATURE (2015)
Discrimination of grasshopper (Orthoptera: Acrididae) diet and niche overlap using next-generation sequencing of gut contents
Beverly McClenaghan et al.
ECOLOGY AND EVOLUTION (2015)
A flexible and economical barcoding approach for highly multiplexed amplicon sequencing of diverse target genes
Craig W. Herbold et al.
FRONTIERS IN MICROBIOLOGY (2015)
Large-Scale Biomonitoring of Remote and Threatened Ecosystems via High-Throughput Sequencing
Joel F. Gibson et al.
PLoS One (2015)
Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform
Shadi Shokralla et al.
SCIENTIFIC REPORTS (2015)
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Alexandros Stamatakis
BIOINFORMATICS (2014)
The role of replicates for error mitigation in next-generation sequencing
Kimberly Robasky et al.
NATURE REVIEWS GENETICS (2014)
An improved dual-indexing approach for multiplexed 16S rRNA gene sequencing on the Illumina MiSeq platform
Douglas W. Fadrosh et al.
MICROBIOME (2014)
Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
James J. Kozich et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Reliable, verifiable and efficient monitoring of biodiversity via metabarcoding
Yinqiu Ji et al.
ECOLOGY LETTERS (2013)
A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents
Matthieu Leray et al.
FRONTIERS IN ZOOLOGY (2013)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
How to fail at species delimitation
Bryan C. Carstens et al.
MOLECULAR ECOLOGY (2013)
Obligate mutualism within a host drives the extreme specialization of a fig wasp genome
Jin-Hua Xiao et al.
GENOME BIOLOGY (2013)
NAVIGATING THE TIP OF THE GENOMIC ICEBERG: NEXT-GENERATION SEQUENCING FOR PLANT SYSTEMATICS
Shannon C. K. Straub et al.
AMERICAN JOURNAL OF BOTANY (2012)
Multi-locus species delimitation in closely related animals and fungi: one marker is not enough
Julian R. Dupuis et al.
MOLECULAR ECOLOGY (2012)
Towards next-generation biodiversity assessment using DNA metabarcoding
Pierre Taberlet et al.
MOLECULAR ECOLOGY (2012)
An Extreme Case of Plant-Insect Codiversification: Figs and Fig-Pollinating Wasps
Astrid Cruaud et al.
SYSTEMATIC BIOLOGY (2012)
The Effect of Geographical Scale of Sampling on DNA Barcoding
Johannes Bergsten et al.
SYSTEMATIC BIOLOGY (2012)
Barcoded Primers Used in Multiplex Amplicon Pyrosequencing Bias Amplification
David Berry et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Quality control and preprocessing of metagenomic datasets
Robert Schmieder et al.
BIOINFORMATICS (2011)
FLASH: fast length adjustment of short reads to improve genome assemblies
Tanja Magoc et al.
BIOINFORMATICS (2011)
The occurrence of mtDNA heteroplasmy in multiple cetacean species
Nicole L. Vollmer et al.
CURRENT GENETICS (2011)
Out of Australia and back again: the world-wide historical biogeography of non-pollinating fig wasps (Hymenoptera: Sycophaginae)
Astrid Cruaud et al.
JOURNAL OF BIOGEOGRAPHY (2011)
Molecular detection of trophic links in a complex insect host-parasitoid food web
Jan Hrcek et al.
MOLECULAR ECOLOGY RESOURCES (2011)
Nuclear insertions and heteroplasmy of mitochondrial DNA as two sources of intra-individual genomic variation in grasshoppers
Karine Berthier et al.
SYSTEMATIC ENTOMOLOGY (2011)
Comparative performances of DNA barcoding across insect orders
Massimiliano Virgilio et al.
BMC BIOINFORMATICS (2010)
TreeGraph 2: Combining and visualizing evidence from different phylogenetic analyses
Ben C. Stoever et al.
BMC BIOINFORMATICS (2010)
Mitochondrial heteroplasmy and DNA barcoding in Hawaiian Hylaeus (Nesoprosopis) bees (Hymenoptera: Colletidae)
Karl N. Magnacca et al.
BMC EVOLUTIONARY BIOLOGY (2010)
Bayesian species delimitation in West African forest geckos (Hemidactylus fasciatus)
Adam D. Leache et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2010)
Incorporation of mitochondrial fragments in the nuclear genome (Numts) of the longhorned beetle Monochamus galloprovincialis (Coleoptera, Cerambycidae)
F. A. Koutroumpa et al.
JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH (2009)
Four years of DNA barcoding: Current advances and prospects
Lise Frezal et al.
INFECTION GENETICS AND EVOLUTION (2008)
Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified
Hojun Song et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
DNA barcoding cannot reliably identify species of the blowfly genus Protocalliphora (Diptera: Calliphoridae)
T. L. Whitworth et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2007)
Profiling phylogenetic informativeness
Jeffrey P. Townsend
SYSTEMATIC BIOLOGY (2007)
Recent advances in DNA taxonomy
A. P. Vogler et al.
JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH (2007)
Evaluating alternative hypotheses for the early evolution and diversification of ants
Sean G. Brady et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
DNA barcoding and taxonomy in diptera: A tale of high intraspecific variability and low identification success
Rudolf Meier et al.
SYSTEMATIC BIOLOGY (2006)
Missing data, incomplete taxa, and phylogenetic accuracy
JJ Wiens
SYSTEMATIC BIOLOGY (2003)
Biological identifications through DNA barcodes
PDN Hebert et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2003)